README.rst
setup.py
./cnvkit.py
./scripts/genome2access.py
./scripts/refFlat2bed.py
./scripts/reference2targets.py
/home/etal/code/cnvkit/cnvkit.py
/home/etal/code/cnvkit/scripts/genome2access.py
/home/etal/code/cnvkit/scripts/refFlat2bed.py
/home/etal/code/cnvkit/scripts/reference2targets.py
CNVkit.egg-info/PKG-INFO
CNVkit.egg-info/SOURCES.txt
CNVkit.egg-info/dependency_links.txt
CNVkit.egg-info/requires.txt
CNVkit.egg-info/top_level.txt
cnvlib/__init__.py
cnvlib/_cnarray.py
cnvlib/_version.py
cnvlib/access.py
cnvlib/antitarget.py
cnvlib/call.py
cnvlib/cnary.py
cnvlib/commands.py
cnvlib/core.py
cnvlib/coverage.py
cnvlib/diagram.py
cnvlib/export.py
cnvlib/fix.py
cnvlib/gary.py
cnvlib/importers.py
cnvlib/jenks.py
cnvlib/metrics.py
cnvlib/parallel.py
cnvlib/params.py
cnvlib/plots.py
cnvlib/rary.py
cnvlib/reference.py
cnvlib/reports.py
cnvlib/smoothing.py
cnvlib/target.py
cnvlib/vary.py
cnvlib/ngfrills/__init__.py
cnvlib/ngfrills/faidx.py
cnvlib/ngfrills/regions.py
cnvlib/ngfrills/samutil.py
cnvlib/ngfrills/shared.py
cnvlib/segmentation/__init__.py
cnvlib/segmentation/haar.py
test/test_cnvlib.py
test/test_haar.py
test/test_r.py