LICENSE
README.md
pyproject.toml
setup.cfg
setup.py
cell2location/__init__.py
cell2location/run_colocation.py
cell2location.egg-info/PKG-INFO
cell2location.egg-info/SOURCES.txt
cell2location.egg-info/dependency_links.txt
cell2location.egg-info/requires.txt
cell2location.egg-info/top_level.txt
cell2location/cluster_averages/__init__.py
cell2location/cluster_averages/cluster_averages.py
cell2location/cluster_averages/markers_by_hierarhy.py
cell2location/cluster_averages/select_features.py
cell2location/distributions/AutoAmortisedNormalMessenger.py
cell2location/distributions/AutoNormalEncoder.py
cell2location/distributions/NegativeBinomial.py
cell2location/distributions/__init__.py
cell2location/distributions/transforms.py
cell2location/models/__init__.py
cell2location/models/_cell2location_WTA_model.py
cell2location/models/_cell2location_WTA_module.py
cell2location/models/_cell2location_model.py
cell2location/models/_cell2location_module.py
cell2location/models/base/__init__.py
cell2location/models/base/_pyro_base_loc_module.py
cell2location/models/base/_pyro_base_reference_module.py
cell2location/models/base/_pyro_mixin.py
cell2location/models/base/base_model.py
cell2location/models/downstream/ArchetypalAnalysis.py
cell2location/models/downstream/CoLocatedGroupsSklearnNMF.py
cell2location/models/downstream/__init__.py
cell2location/models/reference/__init__.py
cell2location/models/reference/_reference_model.py
cell2location/models/reference/_reference_module.py
cell2location/models/simplified/__init__.py
cell2location/models/simplified/_cell2location_v3_no_factorisation_module.py
cell2location/models/simplified/_cell2location_v3_no_mg_module.py
cell2location/nn/__init__.py
cell2location/nn/fclayers.py
cell2location/nn/fclayers_context.py
cell2location/plt/RotateCrop.py
cell2location/plt/__init__.py
cell2location/plt/mapping_video.py
cell2location/plt/plot_expected_vs_obs.py
cell2location/plt/plot_factor_spatial.py
cell2location/plt/plot_heatmap.py
cell2location/plt/plot_in_1D.py
cell2location/plt/plot_spatial.py
cell2location/utils/__init__.py
cell2location/utils/_spatial_knn.py
cell2location/utils/filtering.py