Metadata-Version: 2.1
Name: moana
Version: 0.1.1
Summary: Moana: A robust and scalable cell type classification framework for single-cell RNA-Seq data.
Home-page: https://github.com/yanailab/moana
Author: Florian Wagner
Author-email: florian.wagner@nyu.edu
License: proprietary
Description: ## Moana: A robust and scalable cell type classification framework for single-cell RNA-Seq data
        
        This repository contains a Python implementation of the Moana framework for predicting cell types in single-cell RNA-Seq data ([Wagner and Yanai, 2018](https://www.biorxiv.org/content/early/2018/04/09/217737)).
        
        ### Installation
        
        #### Step 1: Install Python and the Python packages that Moana depends on
        
        Moana requires Python version 3.5, 3.6, or 3.7, as well as the Python packages *pandas*, *scikit-learn*, and *plotly*.
        
        The easiest way to install Python as well as these packages is to [download and install Anaconda](https://www.anaconda.com/download). Anaconda is a distribution of Python that already includes a lot of packages, including pandas, scikit-learn, and plotly. Alternatively, you can [download and install Miniconda](https://conda.io/miniconda.html), and use the *conda* command to create a new Python 3 environment and install the required packages. The latter option takes up less disk space but also requires some knowledge of how to use conda, the package/environment manager that underlies both Anaconda and Miniconda.
        
        #### Step 2: Install Moana
        
        To install Moana, make sure you have activated/selected the correct conda environment, and then type:
        
        ```console
        $ pip install moana
        ```
        
        ### Changelog
        
        #### 10/30/2018 - Version 0.1.1 released
        
        This is the initial release of **Moana**. We used this version to construct the cell type classifiers described in our preprint. Additional documentation is forthcoming.
        
Platform: UNKNOWN
Classifier: Development Status :: 3 - Alpha
Classifier: Intended Audience :: Developers
Classifier: Intended Audience :: Science/Research
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Classifier: License :: Other/Proprietary License
Classifier: Programming Language :: Python :: 3.5
Classifier: Programming Language :: Python :: 3.6
Classifier: Programming Language :: Python :: 3.7
Description-Content-Type: text/markdown
Provides-Extra: tests
Provides-Extra: docs
