.pylintrc
LICENSE
MANIFEST.in
README.rst
setup.cfg
setup.py
tox.ini
docs/CHANGELOG.rst
docs/conf.py
docs/contributing.rst
docs/index.rst
docs/ref.rst
docs/start.rst
docs/tutorial-diffexp.rst
docs/tutorial-resources.rst
docs/tutorial-running-processes.rst
docs/tutorial-upload.rst
docs/tutorial-writing-processes.rst
docs/tutorials.rst
docs/files/example_index.py
docs/files/example_intro.py
docs/files/example_run.py
docs/files/usage.py
docs/images/collections_relation.jpg
docs/images/define_sample_collection_relations-01.png
docs/images/define_sample_collection_relations-02.png
docs/images/define_sample_collection_relations-03.png
docs/images/defined-relations.jpg
docs/images/input_schema.jpg
docs/images/resolwe_resdk.jpg
resdk/__about__.py
resdk/__init__.py
resdk/exceptions.py
resdk/query.py
resdk/resdk_logger.py
resdk/resolwe.py
resdk/scripts.py
resdk.egg-info/PKG-INFO
resdk.egg-info/SOURCES.txt
resdk.egg-info/dependency_links.txt
resdk.egg-info/entry_points.txt
resdk.egg-info/not-zip-safe
resdk.egg-info/requires.txt
resdk.egg-info/top_level.txt
resdk/analysis/__init__.py
resdk/analysis/_register.py
resdk/analysis/alignment.py
resdk/analysis/chip_seq.py
resdk/analysis/differential_expressions.py
resdk/analysis/expressions.py
resdk/analysis/plots.py
resdk/resources/__init__.py
resdk/resources/base.py
resdk/resources/collection.py
resdk/resources/data.py
resdk/resources/descriptor.py
resdk/resources/permissions.py
resdk/resources/process.py
resdk/resources/relation.py
resdk/resources/sample.py
resdk/resources/user.py
resdk/resources/utils.py
resdk/resources/kb/__init__.py
resdk/resources/kb/feature.py
resdk/resources/kb/mapping.py
resdk/shortcuts/__init__.py
resdk/shortcuts/collection.py
resdk/shortcuts/help_text.py
resdk/tests/__init__.py
resdk/tests/files/bowtie.yaml
resdk/tests/files/bowtie_bad.yaml
resdk/tests/files/custom_process.yaml
resdk/tests/files/dummy_bam.bam
resdk/tests/files/dummy_cuffquant.cxb
resdk/tests/files/dummy_genome.fasta
resdk/tests/files/dummy_gtf.gtf
resdk/tests/files/dummy_reads.fastq
resdk/tests/files/example.fastq
resdk/tests/files/reads.fastq.gz
resdk/tests/files/reads_paired_abyss_1.fastq.gz
resdk/tests/files/reads_paired_abyss_2.fastq.gz
resdk/tests/files/sum.py
resdk/tests/files/tool1.py
resdk/tests/functional/__init__.py
resdk/tests/functional/base.py
resdk/tests/functional/analysis/__init__.py
resdk/tests/functional/analysis/e2e_alignment.py
resdk/tests/functional/analysis/e2e_chip_seq.py
resdk/tests/functional/analysis/e2e_differential_expressions.py
resdk/tests/functional/analysis/e2e_expressions.py
resdk/tests/functional/permissions/e2e_permissions.py
resdk/tests/mocks/__init__.py
resdk/tests/mocks/data.py
resdk/tests/unit/__init__.py
resdk/tests/unit/test_base.py
resdk/tests/unit/test_collections.py
resdk/tests/unit/test_collections_shortcuts.py
resdk/tests/unit/test_data.py
resdk/tests/unit/test_decorators.py
resdk/tests/unit/test_exceptions.py
resdk/tests/unit/test_process.py
resdk/tests/unit/test_query.py
resdk/tests/unit/test_relations.py
resdk/tests/unit/test_resolwe.py
resdk/tests/unit/test_users.py
resdk/tests/unit/test_utils.py
resdk/utils/__init__.py
resdk/utils/decorators.py