.gitignore
.readthedocs.yaml
CITATION.cff
CODE_OF_CONDUCT.md
LICENSE
README.md
pyproject.toml
setup.cfg
setup.py
.github/pull_request_template.md
.github/ISSUE_TEMPLATE/bug-report.md
.github/workflows/ci.yml
.github/workflows/code_formatting.yml
.github/workflows/python-publish.yml
FESTIM.egg-info/PKG-INFO
FESTIM.egg-info/SOURCES.txt
FESTIM.egg-info/dependency_links.txt
FESTIM.egg-info/requires.txt
FESTIM.egg-info/top_level.txt
docs/environment.yml
docs/source/Makefile
docs/source/conf.py
docs/source/examples.rst
docs/source/getting_started.rst
docs/source/index.rst
docs/source/make.bat
docs/source/publications.rst
docs/source/theory.rst
docs/source/api/boundary_conditions.rst
docs/source/api/concentration.rst
docs/source/api/exports.rst
docs/source/api/festim.rst
docs/source/api/generic_simulation.rst
docs/source/api/h_transport_simulation.rst
docs/source/api/helpers.rst
docs/source/api/initial_condition.rst
docs/source/api/materials.rst
docs/source/api/meshing.rst
docs/source/api/settings.rst
docs/source/api/sources.rst
docs/source/api/stepsize.rst
docs/source/api/temperature.rst
docs/source/bibliography/references.bib
docs/source/devguide/index.rst
docs/source/images/recomb_sketch.png
docs/source/userguide/beginners_guide.rst
docs/source/userguide/boundary_conditions.rst
docs/source/userguide/export_post_processing.rst
docs/source/userguide/index.rst
docs/source/userguide/materials.rst
docs/source/userguide/mesh.rst
docs/source/userguide/settings.rst
docs/source/userguide/simulations.rst
docs/source/userguide/sources.rst
docs/source/userguide/temperature.rst
docs/source/userguide/traps.rst
docs/source/userguide/troubleshooting.rst
docs/source/userguide/units.rst
festim/__init__.py
festim/_version.py
festim/generic_simulation.py
festim/h_transport_problem.py
festim/helpers.py
festim/initial_condition.py
festim/settings.py
festim/stepsize.py
festim/boundary_conditions/__init__.py
festim/boundary_conditions/boundary_condition.py
festim/boundary_conditions/dirichlets/__init__.py
festim/boundary_conditions/dirichlets/custom_dc.py
festim/boundary_conditions/dirichlets/dc_imp.py
festim/boundary_conditions/dirichlets/dirichlet_bc.py
festim/boundary_conditions/dirichlets/henrys_bc.py
festim/boundary_conditions/dirichlets/sieverts_bc.py
festim/boundary_conditions/fluxes/__init__.py
festim/boundary_conditions/fluxes/convective_flux.py
festim/boundary_conditions/fluxes/dissociation_flux.py
festim/boundary_conditions/fluxes/flux_bc.py
festim/boundary_conditions/fluxes/flux_custom.py
festim/boundary_conditions/fluxes/mass_flux.py
festim/boundary_conditions/fluxes/recombination_flux.py
festim/concentration/__init__.py
festim/concentration/concentration.py
festim/concentration/mobile.py
festim/concentration/theta.py
festim/concentration/traps/__init__.py
festim/concentration/traps/extrinsic_trap.py
festim/concentration/traps/neutron_induced_trap.py
festim/concentration/traps/trap.py
festim/concentration/traps/traps.py
festim/exports/__init__.py
festim/exports/export.py
festim/exports/exports.py
festim/exports/trap_density_xdmf.py
festim/exports/txt_export.py
festim/exports/xdmf_export.py
festim/exports/derived_quantities/__init__.py
festim/exports/derived_quantities/average_surface.py
festim/exports/derived_quantities/average_volume.py
festim/exports/derived_quantities/derived_quantities.py
festim/exports/derived_quantities/derived_quantity.py
festim/exports/derived_quantities/hydrogen_flux.py
festim/exports/derived_quantities/maximum_surface.py
festim/exports/derived_quantities/maximum_volume.py
festim/exports/derived_quantities/minimum_surface.py
festim/exports/derived_quantities/minimum_volume.py
festim/exports/derived_quantities/point_value.py
festim/exports/derived_quantities/surface_flux.py
festim/exports/derived_quantities/thermal_flux.py
festim/exports/derived_quantities/total_surface.py
festim/exports/derived_quantities/total_volume.py
festim/materials/__init__.py
festim/materials/material.py
festim/materials/materials.py
festim/meshing/__init__.py
festim/meshing/mesh.py
festim/meshing/mesh_1d.py
festim/meshing/mesh_from_refinements.py
festim/meshing/mesh_from_vertices.py
festim/meshing/mesh_from_xdmf.py
festim/sources/__init__.py
festim/sources/source.py
festim/sources/source_implantation_flux.py
festim/temperature/__init__.py
festim/temperature/temperature.py
festim/temperature/temperature_from_xdmf.py
festim/temperature/temperature_solver.py
test/__init__.py
test/h_transport_problem/__init__.py
test/h_transport_problem/test_initialisation.py
test/h_transport_problem/test_solving.py
test/heat_transfer_problem/__init__.py
test/heat_transfer_problem/test_solving.py
test/simulation/__init__.py
test/simulation/test_construction.py
test/simulation/test_initialise.py
test/simulation/test_meshing.py
test/simulation/test_postprocessing_integration.py
test/system/__init__.py
test/system/test_chemical_potential.py
test/system/test_cylindrical_coordinates.py
test/system/test_extrinsic_traps.py
test/system/test_misc.py
test/system/test_spherical_coordinates.py
test/system/test_system.py
test/unit/__init__.py
test/unit/test_boundary_conditions.py
test/unit/test_concentration.py
test/unit/test_helpers.py
test/unit/test_initial_condition.py
test/unit/test_materials.py
test/unit/test_meshing.py
test/unit/test_mobile.py
test/unit/test_sources.py
test/unit/test_stepsize.py
test/unit/test_temperature.py
test/unit/test_theta.py
test/unit/test_exports/__init__.py
test/unit/test_exports/test_trap_density_xdmf_export.py
test/unit/test_exports/test_txt_export.py
test/unit/test_exports/test_txt_exports.py
test/unit/test_exports/test_xdmf_export.py
test/unit/test_exports/test_derived_quantities/__init__.py
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test/unit/test_exports/test_derived_quantities/test_average_volume.py
test/unit/test_exports/test_derived_quantities/test_derived_quantities.py
test/unit/test_exports/test_derived_quantities/test_hydrogen_flux.py
test/unit/test_exports/test_derived_quantities/test_maximum_surface.py
test/unit/test_exports/test_derived_quantities/test_maximum_volume.py
test/unit/test_exports/test_derived_quantities/test_minimum_surface.py
test/unit/test_exports/test_derived_quantities/test_minimum_volume.py
test/unit/test_exports/test_derived_quantities/test_point_value.py
test/unit/test_exports/test_derived_quantities/test_surface_flux.py
test/unit/test_exports/test_derived_quantities/test_surface_quantity.py
test/unit/test_exports/test_derived_quantities/test_thermal_flux.py
test/unit/test_exports/test_derived_quantities/test_total_surface.py
test/unit/test_exports/test_derived_quantities/test_total_volume.py
test/unit/test_exports/test_derived_quantities/test_volume_quantity.py
test/unit/test_traps/__init__.py
test/unit/test_traps/test_extrinsic_trap.py
test/unit/test_traps/test_neutron_induced_trap.py
test/unit/test_traps/test_trap.py
test/unit/test_traps/test_traps.py