Metadata-Version: 2.0
Name: pergola
Version: 0.1.7
Summary: A library to analyze and visualize behavioral data by unlocking genomic tools
Home-page: http://github.com/cbcrg/pergola
Author: Jose Espinosa-Carrasco
Author-email: espinosacarrascoj@gmail.com
License: GPLv3
Description-Content-Type: UNKNOWN
Platform: UNKNOWN
Classifier: Development Status :: 2 - Pre-Alpha
Classifier: Environment :: Console
Classifier: Intended Audience :: Developers
Classifier: Intended Audience :: Other Audience
Classifier: Intended Audience :: Science/Research
Classifier: License :: OSI Approved :: GNU General Public License (GPL)
Classifier: Natural Language :: English
Classifier: Operating System :: MacOS
Classifier: Operating System :: POSIX :: Linux
Classifier: Operating System :: Microsoft :: Windows
Classifier: Programming Language :: Python
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Classifier: Topic :: Scientific/Engineering :: Information Analysis
Classifier: Topic :: Scientific/Engineering :: Visualization
Classifier: Topic :: Software Development :: Libraries :: Python Modules

|Pergola web server|
====================

.. figure:: https://circleci.com/gh/cbcrg/pergola.png?style=shield
   :alt: CircleCI status

   CircleCI status

A python library for the conversion of behavioral data into genome
browser compatible formats. Once behavioral data is formatted in genomic
formats it is easy to use genomic software tools for its analysis. For
instance you can query your data using BEDTools or visualize your
records using a genome browser (see snapshot below corresponding to a
rendering of mice feeding behavior on the
`IGV <http://software.broadinstitute.org/software/igv/>`__ genome
browser).

For more information, instructions for installation and tutorials please
visit:

`Pergola documentation <http://cbcrg.github.io/pergola/>`__

You can also use our web server still under development:

`Pergola web server <http://pergola.crg.eu/>`__

.. figure:: https://github.com/cbcrg/pergola/blob/master/doc/source/images/mouse_hf_igv.png
   :alt: Mouse feeding behavior-IGV snapshot

   Mouse feeding behavior-IGV snapshot

.. |Pergola web server| image:: https://cloud.githubusercontent.com/assets/6224346/12887167/dcf80b24-ce72-11e5-8389-90122fd6c84e.png



