Metadata-Version: 2.1
Name: diffcool
Version: 0.1.1
Summary: HiC cooler calculator
Project-URL: Homepage, https://pypi.org/project/diffcool/
Author-email: "Takaho A. Endo" <takaho.endo@gmail.com>
License-File: LICENSE
Classifier: License :: OSI Approved :: MIT License
Classifier: Operating System :: OS Independent
Classifier: Programming Language :: Python :: 3
Requires-Python: >=3.7
Requires-Dist: h5py
Requires-Dist: mgzip
Requires-Dist: numpy
Requires-Dist: pandas
Requires-Dist: scipy
Description-Content-Type: text/markdown

# diffcool
## INTRODUCTION
diffcool is a calculator of cool/mcool files provided by Hi-C processing software.
This software generates Hi-C visualization tool-compatible mcool files.

## INSTALL
```
pip install diffcool
```

## USAGE
```
diffcool.py [-h] [-i mcool files [mcool files ...]] [-c control mcool files] [-t treated mcool files] [-o directory] [--resolution RESOLUTION] [--verbose]

```

```
Options:
  -h, --help            show this help message and exit
  -i mcool files [mcool files ...]
                        mcool files
  -c control mcool files
                        mcool file
  -t treated mcool files
                        mcool file
  -o directory          output directory
  --resolution RESOLUTION
                        resolution
  --verbose
  ```
