Metadata-Version: 2.1
Name: mavis-temp
Version: 2.0.0
Summary: Config validation for running MAVIS via Snakemake
Home-page: https://github.com/zhemingfan/mavis_config
Author: Caralyn Reisle
Author-email: creisle@bcgsc.ca
License: UNKNOWN
Download-URL: https://github.com/zhemingfan/mavis_config/archive/v2.0.0.tar.gz
Platform: UNKNOWN
Requires-Python: >=3.6
Description-Content-Type: text/markdown
License-File: LICENSE
Requires-Dist: snakemake (<7,>=6.1.1)
Requires-Dist: braceexpand
Provides-Extra: deploy
Requires-Dist: twine ; extra == 'deploy'
Requires-Dist: m2r ; extra == 'deploy'
Requires-Dist: wheel ; extra == 'deploy'
Provides-Extra: dev
Requires-Dist: black (==20.8b1) ; extra == 'dev'
Requires-Dist: flake8 ; extra == 'dev'
Requires-Dist: mkdocs (==1.1.2) ; extra == 'dev'
Requires-Dist: markdown-refdocs ; extra == 'dev'
Requires-Dist: mkdocs-material (==5.4.0) ; extra == 'dev'
Requires-Dist: markdown-include ; extra == 'dev'
Requires-Dist: mkdocs-simple-hooks (==0.1.2) ; extra == 'dev'
Requires-Dist: coverage (>=4.2) ; extra == 'dev'
Requires-Dist: pycodestyle (>=2.3.1) ; extra == 'dev'
Requires-Dist: pytest ; extra == 'dev'
Requires-Dist: pytest-cov ; extra == 'dev'
Requires-Dist: twine ; extra == 'dev'
Requires-Dist: m2r ; extra == 'dev'
Requires-Dist: wheel ; extra == 'dev'
Provides-Extra: docs
Requires-Dist: mkdocs (==1.1.2) ; extra == 'docs'
Requires-Dist: markdown-refdocs ; extra == 'docs'
Requires-Dist: mkdocs-material (==5.4.0) ; extra == 'docs'
Requires-Dist: markdown-include ; extra == 'docs'
Requires-Dist: mkdocs-simple-hooks (==0.1.2) ; extra == 'docs'
Provides-Extra: test
Requires-Dist: coverage (>=4.2) ; extra == 'test'
Requires-Dist: pycodestyle (>=2.3.1) ; extra == 'test'
Requires-Dist: pytest ; extra == 'test'
Requires-Dist: pytest-cov ; extra == 'test'

# MAVIS Config

[![build](https://github.com/bcgsc/mavis_config/actions/workflows/build.yml/badge.svg?branch=master)](https://github.com/bcgsc/mavis_config/actions/workflows/build.yml) [![codecov](https://codecov.io/gh/bcgsc/mavis_config/branch/master/graph/badge.svg)](https://codecov.io/gh/bcgsc/mavis_config) ![PyPi](https://img.shields.io/pypi/v/mavis_config.svg)

Workflow configuration validation for [MAVIS](https://github.com/bcgsc/mavis) via snakemake. This package should not be used without [MAVIS](https://github.com/bcgsc/mavis). If you are a [MAVIS](https://github.com/bcgsc/mavis) user, please see [MAVIS](https://github.com/bcgsc/mavis) instead.

## For Developers

This is a separate package from [MAVIS](https://github.com/bcgsc/mavis)
itself so that [MAVIS](https://github.com/bcgsc/mavis) users running snakemake with the
docker container do not need to install [MAVIS](https://github.com/bcgsc/mavis) to check their snakemake config JSON.
This is to ensure that all the hard-to-install [MAVIS](https://github.com/bcgsc/mavis) dependencies are not required to run 
snakemake with docker.


