Metadata-Version: 1.1
Name: pyopen
Version: 0.0.5
Summary: launch an interactive ipython session with specified files opened and parsed
Home-page: https://github.com/timodonnell/pyopen
Author: Tim O'Donnell
Author-email: timodonnell@gmail.com
License: Apache License
Download-URL: https://github.com/timodonnell/pyopen/tarball/0.0.5
Description: pyopen
        ======
        
        pyopen is a command-line tool for quickly inspecting files using python. It drops you into an interactive IPython session with the parsed files available as local variables.
        
        Currently supports csv/tsv files (uses pandas and also supports gzip / bz2 compression), excel, json, and pickle files. We welcome contributions of loaders for other file types.
        
        Installation
        -------------
        
        ::
        
            pip install pyopen
        
        To run the tests:
        
        ::
        
            nosetests
        
        Example
        -------------
        
        ::
        
            $ pyopen test/data/data1.csv
        
            f1 test/data/data1.csv 4.9 kB pandas_csv
        
            Python 2.7.10 (default, May 26 2015, 13:01:57)
            Type "copyright", "credits" or "license" for more information.
        
            IPython 4.0.0 -- An enhanced Interactive Python.
            ?         -> Introduction and overview of IPython's features.
            %quickref -> Quick reference.
            help      -> Python's own help system.
            object?   -> Details about 'object', use 'object??' for extra details.
            1 files loaded:
        
            f1 test/data/data1.csv 4.9 kB pandas_csv
                pandas.DataFrame: 99 rows x 8 cols.
                Columns: patient genome contig interbase_start interbase_end ref alt validation
        
            Variables defined:
                f1 : the parsed file
                loaded : object with attributes for each parsed file (abbreviated filenames, tab completes)
                loaded_filenames : dict from filename to parsed file
                loaded_absolute_filenames : dict from absolute filename to parsed file
                loaded_list : list of the parsed files
        
            To print this message again later, type 'info()'. To quit type 'quit()'.
        
        The variable 'f1' is a pandas DataFrame with the contents of the csv file:
        
        ::
        
            In [1]: f1.head()
            Out[1]:
              patient  genome contig  interbase_start  interbase_end ref alt validation
            0     PT1  GRCh37   chr1         10719783       10719784   T   G   untested
            1     PT1  GRCh37   chr1         11137693       11137694   G   A   verified
            2     PT1  GRCh37   chr1         11826130       11826131   A   T   verified
            3     PT1  GRCh37   chr1         17664605       17664606   C   G   verified
            4     PT1  GRCh37   chr1         26670492       26670493   G   T   verified
        
        You can also pass URLs to pyopen:
        
        ::
        
            $ pyopen https://github.com/timodonnell/pyopen/raw/master/test/data/nasa_19950801.tsv.bz2
            ...
            In [1]: f1.mean()
        
            Out[1]:
            time         8.072857e+08
            response     2.107552e+02
            bytes        1.556397e+04
            referer               NaN
            useragent             NaN
            dtype: float64
            Out[1]: (30969, 9) 
        
        
Platform: UNKNOWN
Classifier: Development Status :: 1 - Planning
Classifier: Intended Audience :: Developers
Classifier: Programming Language :: Python :: 2
Classifier: Programming Language :: Python :: 2.7
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3.4
