Metadata-Version: 2.1
Name: scLift
Version: 0.0.47
Summary: File read and write operations
Author-email: Yu Zhengmin <3236170161@qq.com>
Project-URL: gitee, https://gitee.com/ykenan_yingying/scLift
Keywords: YKenan,scLift,scATAC,Cicero,ChromVAR,Fine-mapping,Single-cell epiomics,Landscape Integration of Fine-mapping Related Traits in Single Cell Epiomics
Classifier: Programming Language :: Python :: 3
Classifier: License :: OSI Approved :: MIT License
Classifier: Operating System :: OS Independent
Requires-Python: >=3.10
Description-Content-Type: text/markdown
License-File: LICENSE
Requires-Dist: numpy==1.24.4
Requires-Dist: matplotlib==3.7.1
Requires-Dist: seaborn==0.12.2
Requires-Dist: pandas==2.0.3
Requires-Dist: anndata==0.9.1
Requires-Dist: scipy==1.11.4
Requires-Dist: scanpy==1.9.3
Requires-Dist: scikit-learn==1.2.2
Requires-Dist: ykenan-file==0.2.3
Requires-Dist: ykenan-util==0.0.5
Requires-Dist: networkx==3.2.1
Requires-Dist: colormap==1.0.4
Requires-Dist: easydev==0.12.1
Requires-Dist: h5py==3.8.0
Requires-Dist: mudata==0.2.3
Requires-Dist: PyComplexHeatmap==1.6.1
Requires-Dist: magic-impute==3.0.0
Requires-Dist: leidenalg==0.10.2
Requires-Dist: scvi-tools==1.1.2

# SCIV

> SCIV: Viewing the integrated landscape of variant mapping at single-cell resolution

> SCIV: 在单细胞分辨率下查看突变映射的整合景观

## 1. 介绍

## 2. 安装

## 3. 上传

> upload

> test

```shell
py -m build
twine check dist/*
twine upload --repository testpypi dist/*
```

> production

```shell
py -m build
twine check dist/*
twine upload dist/*
```

## 4. 使用

```shell
vim ~/.bashrc
export OMP_NUM_THREADS=1
export OPENBLAS_NUM_THREADS=1
source ~/.bashrc

```

> test

```shell
pip3 install -r requirements.txt -i http://mirrors.aliyun.com/pypi/simple/ --trusted-host mirrors.aliyun.com
pip3 install scLift -i https://test.pypi.org/simple/
```

> production

```shell
pip3 install scLift
```
