README.rst
setup.cfg
setup.py
src/framed/__init__.py
src/framed.egg-info/PKG-INFO
src/framed.egg-info/SOURCES.txt
src/framed.egg-info/dependency_links.txt
src/framed.egg-info/top_level.txt
src/framed/bioreactor/__init__.py
src/framed/bioreactor/base.py
src/framed/bioreactor/bioreactors.py
src/framed/bioreactor/dfba.py
src/framed/bioreactor/dyssco.py
src/framed/cobra/__init__.py
src/framed/cobra/deletion.py
src/framed/cobra/essentiality.py
src/framed/cobra/phaseplane.py
src/framed/cobra/plotting.py
src/framed/cobra/reconstruction.py
src/framed/cobra/simulation.py
src/framed/cobra/strain_design.py
src/framed/cobra/variability.py
src/framed/experimental/__init__.py
src/framed/experimental/benchmark.py
src/framed/experimental/fluxutils.py
src/framed/experimental/mathutils.py
src/framed/experimental/reduction.py
src/framed/experimental/sampling.py
src/framed/io/__init__.py
src/framed/io/plaintext.py
src/framed/io/sbml.py
src/framed/kinetic/__init__.py
src/framed/kinetic/fitting.py
src/framed/kinetic/plotting.py
src/framed/kinetic/sampling.py
src/framed/kinetic/simulation.py
src/framed/model/__init__.py
src/framed/model/cbmodel.py
src/framed/model/fixes.py
src/framed/model/model.py
src/framed/model/odemodel.py
src/framed/model/parser.py
src/framed/model/transformation.py
src/framed/omics/__init__.py
src/framed/omics/dataset.py
src/framed/omics/simulation.py
src/framed/solvers/__init__.py
src/framed/solvers/cplex_interface.py
src/framed/solvers/glpk_interface.py
src/framed/solvers/gurobi_interface.py
src/framed/solvers/solver.py
src/framed/unittests/__init__.py
src/framed/unittests/kinetic.py
src/framed/unittests/tests_cobra.py
src/framed/unittests/tests_sbml.py