Metadata-Version: 1.1
Name: framed
Version: 0.3.1
Summary: framed - metabolic modeling for python
Home-page: https://github.com/cdanielmachado/framed
Author: Daniel Machado
Author-email: cdanielmachado@gmail.com
License: Apache License Version 2.0
Description: FRAMED
        ======
        
        *framed* is a python package for analysis and simulation of metabolic
        models. The main focus is to provide support for different modeling
        approaches.
        
        -  Modeling: Constraint-based models, Kinetic models, Bioprocess models
        -  I/O: Import/Export from SBML and/or plain text formats
        -  Solver support: Gurobi, CPLEX, GLPK
        -  COBRA tools:
        
           -  Simulation: FBA, pFBA, loopless-FBA, MOMA, linearMOMA, ROOM
           -  Analysis: FVA, gene essentiality, PhPP, flux envelope plots
           -  Omics integration: GIMME, E-Flux
           -  Strain design: brute force, hill climbing
        
        -  Kinetic tools:
        
           -  Time-course and steady-state simulation
           -  Parameter and flux sampling
           -  Calibration from metabolomics data
        
        -  Bioprocess modeling: Dynamic FBA (single and multi-species)
        
        Documentation
        ~~~~~~~~~~~~~
        
        For documentation and API please check: http://framed.readthedocs.io/
        
        Instalation
        ~~~~~~~~~~~
        
        ::
        
            pip install framed
        
        Credits and License
        ~~~~~~~~~~~~~~~~~~~
        
        Developed at:
        
        -  The Novo Nordisk Fundation Center for Biosustainability (2013)
        -  Centre of Biological Engineering, University of Minho (2014-2015)
        -  European Molecular Biology Laboratory (2016)
        
        Released under an Apache License.
        
Keywords: metabolism modeling
Platform: UNKNOWN
Classifier: Development Status :: 4 - Beta
Classifier: Topic :: Utilities
Classifier: Programming Language :: Python :: 2.7
Classifier: License :: OSI Approved :: Apache Software License
