.gitignore
.pre-commit-config.yaml
.readthedocs.yaml
CODE_OF_CONDUCT.md
CONTRIBUTING.md
LICENSE
README.md
pyproject.toml
tox.ini
.github/ISSUE_TEMPLATE/bug_report.md
.github/ISSUE_TEMPLATE/config.yml
.github/ISSUE_TEMPLATE/feature_request.md
.github/ISSUE_TEMPLATE/other.md
.github/ISSUE_TEMPLATE/question-issue-template.md
docs/Makefile
docs/make.bat
docs/source/conf.py
docs/source/index.rst
docs/source/pages/api.rst
docs/source/pages/_autosummary/mdlearn.data.datasets.contact_map.rst
docs/source/pages/_autosummary/mdlearn.data.datasets.feature_vector.rst
docs/source/pages/_autosummary/mdlearn.data.datasets.point_cloud.rst
docs/source/pages/_autosummary/mdlearn.data.datasets.rst
docs/source/pages/_autosummary/mdlearn.data.datasets.time_contact_map.rst
docs/source/pages/_autosummary/mdlearn.data.preprocess.align.iterative_means_align.rst
docs/source/pages/_autosummary/mdlearn.data.preprocess.align.kabsch_align.rst
docs/source/pages/_autosummary/mdlearn.data.preprocess.align.rst
docs/source/pages/_autosummary/mdlearn.data.preprocess.decorrelation.rst
docs/source/pages/_autosummary/mdlearn.data.preprocess.decorrelation.spatial.rst
docs/source/pages/_autosummary/mdlearn.data.preprocess.decorrelation.temporal.rst
docs/source/pages/_autosummary/mdlearn.data.preprocess.rst
docs/source/pages/_autosummary/mdlearn.data.rst
docs/source/pages/_autosummary/mdlearn.data.utils.rst
docs/source/pages/_autosummary/mdlearn.metrics.rst
docs/source/pages/_autosummary/mdlearn.nn.models.aae.model.rst
docs/source/pages/_autosummary/mdlearn.nn.models.aae.point_3d_aae.rst
docs/source/pages/_autosummary/mdlearn.nn.models.aae.rst
docs/source/pages/_autosummary/mdlearn.nn.models.ae.linear.rst
docs/source/pages/_autosummary/mdlearn.nn.models.ae.lstm.rst
docs/source/pages/_autosummary/mdlearn.nn.models.ae.model.rst
docs/source/pages/_autosummary/mdlearn.nn.models.ae.rst
docs/source/pages/_autosummary/mdlearn.nn.models.lstm.rst
docs/source/pages/_autosummary/mdlearn.nn.models.rst
docs/source/pages/_autosummary/mdlearn.nn.models.vae.model.rst
docs/source/pages/_autosummary/mdlearn.nn.models.vae.rst
docs/source/pages/_autosummary/mdlearn.nn.models.vae.symmetric_conv2d_vae.rst
docs/source/pages/_autosummary/mdlearn.nn.models.vde.model.rst
docs/source/pages/_autosummary/mdlearn.nn.models.vde.rst
docs/source/pages/_autosummary/mdlearn.nn.models.vde.symmetric_conv2d_vde.rst
docs/source/pages/_autosummary/mdlearn.nn.models.wae.model.rst
docs/source/pages/_autosummary/mdlearn.nn.models.wae.rst
docs/source/pages/_autosummary/mdlearn.nn.models.wae.symmetric_conv2d_wae.rst
docs/source/pages/_autosummary/mdlearn.nn.modules.conv1d_encoder.rst
docs/source/pages/_autosummary/mdlearn.nn.modules.conv2d_decoder.rst
docs/source/pages/_autosummary/mdlearn.nn.modules.conv2d_encoder.rst
docs/source/pages/_autosummary/mdlearn.nn.modules.dense_net.rst
docs/source/pages/_autosummary/mdlearn.nn.modules.linear_decoder.rst
docs/source/pages/_autosummary/mdlearn.nn.modules.linear_discriminator.rst
docs/source/pages/_autosummary/mdlearn.nn.modules.lstm_net.rst
docs/source/pages/_autosummary/mdlearn.nn.modules.rst
docs/source/pages/_autosummary/mdlearn.nn.rst
docs/source/pages/_autosummary/mdlearn.nn.utils.rst
docs/source/pages/_autosummary/mdlearn.rst
docs/source/pages/_autosummary/mdlearn.utils.rst
docs/source/pages/_autosummary/mdlearn.visualize.rst
examples/heiranca.py
examples/anca/spike_anca.ipynb
examples/point_3d_aae/aae3d.py
examples/point_3d_aae/config.py
examples/point_3d_aae/point_3d_aae_template.yaml
examples/point_3d_aae/train.py
examples/symmetric_conv2d_vae/hpo_sweep/sweep-bayes-hyperband.yaml
examples/symmetric_conv2d_vae/hpo_sweep/sweep-random-hyperband.yaml
examples/symmetric_conv2d_vae/hpo_sweep/symmetric_conv2d_vae_sweep_default.yaml
examples/symmetric_conv2d_vae/hpo_sweep/train.py
examples/symmetric_conv2d_vae/training/symmetric_conv2d_vae_template.yaml
examples/symmetric_conv2d_vae/training/train.py
examples/symmetric_conv2d_vde/config.py
examples/symmetric_conv2d_vde/symmetric_conv2d_vde_template.yaml
examples/symmetric_conv2d_vde/train.py
examples/symmetric_conv2d_wae/sweep/config.py
examples/symmetric_conv2d_wae/sweep/sweep-random-hyperband.yaml
examples/symmetric_conv2d_wae/sweep/symmetric_conv2d_wae_sweep_default.yaml
examples/symmetric_conv2d_wae/sweep/train.py
mdlearn/__init__.py
mdlearn/metrics.py
mdlearn/utils.py
mdlearn/visualize.py
mdlearn.egg-info/PKG-INFO
mdlearn.egg-info/SOURCES.txt
mdlearn.egg-info/dependency_links.txt
mdlearn.egg-info/requires.txt
mdlearn.egg-info/top_level.txt
mdlearn/data/__init__.py
mdlearn/data/utils.py
mdlearn/data/datasets/__init__.py
mdlearn/data/datasets/contact_map.py
mdlearn/data/datasets/feature_vector.py
mdlearn/data/datasets/point_cloud.py
mdlearn/data/datasets/time_contact_map.py
mdlearn/data/preprocess/__init__.py
mdlearn/data/preprocess/align/__init__.py
mdlearn/data/preprocess/align/iterative_means_align.py
mdlearn/data/preprocess/align/kabsch_align.py
mdlearn/data/preprocess/decorrelation/__init__.py
mdlearn/data/preprocess/decorrelation/spatial.py
mdlearn/data/preprocess/decorrelation/temporal.py
mdlearn/nn/__init__.py
mdlearn/nn/utils.py
mdlearn/nn/models/__init__.py
mdlearn/nn/models/lstm.py
mdlearn/nn/models/aae/__init__.py
mdlearn/nn/models/aae/model.py
mdlearn/nn/models/aae/point_3d_aae.py
mdlearn/nn/models/ae/__init__.py
mdlearn/nn/models/ae/linear.py
mdlearn/nn/models/ae/lstm.py
mdlearn/nn/models/ae/model.py
mdlearn/nn/models/vae/__init__.py
mdlearn/nn/models/vae/model.py
mdlearn/nn/models/vae/symmetric_conv2d_vae.py
mdlearn/nn/models/vde/__init__.py
mdlearn/nn/models/vde/model.py
mdlearn/nn/models/vde/symmetric_conv2d_vde.py
mdlearn/nn/models/wae/__init__.py
mdlearn/nn/models/wae/model.py
mdlearn/nn/models/wae/symmetric_conv2d_wae.py
mdlearn/nn/modules/__init__.py
mdlearn/nn/modules/conv1d_encoder.py
mdlearn/nn/modules/conv2d_decoder.py
mdlearn/nn/modules/conv2d_encoder.py
mdlearn/nn/modules/dense_net.py
mdlearn/nn/modules/linear_decoder.py
mdlearn/nn/modules/linear_discriminator.py
mdlearn/nn/modules/lstm_net.py
test/data/test_utils.py
test/data/datasets/test_feature_vector.py
test/nn/models/test_lstm.py
test/nn/models/ae/test_lstmae.py
test/nn/modules/test_lstm_net.py