Metadata-Version: 1.1
Name: ecopy
Version: 0.1.1
Summary: EcoPy: Ecological Data Analysis in Python
Home-page: https://github.com/Auerilas/ecopy
Author: Nathan Lemoine
Author-email: lemoine.nathan@gmail.com
License: MIT
Description: EcoPy: Python for Ecological Data Analyses
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        .. image:: https://zenodo.org/badge/17555/Auerilas/ecopy.svg
           :target: https://zenodo.org/badge/latestdoi/17555/Auerilas/ecopy
           
        **EcoPy** provides tools for ecological data analyses. In general, it focuses on multivariate data analysis, which can be useful in any field, but with particular attention to those methods widely used in ecology. `The homepage, with full documentation and examples, can be found here <http://ecopy.readthedocs.org>`_
        
        Install via 'pip install ecopy'
        
        What's New
        =======
        0.1.1
        --------
        - More Python 3.x compatibility
        - Fixed the transform function to not alter the original data matrix
        
        
        License
        =====
        **EcoPy** is distributed under the MIT license
        
        Version
        =====
        0.1.1
        
        Examples
        ======
        Transforming a site x species matrix, dividing by site totals::
        
        	import ecopy as ep
        	varespec = ep.load_data('varespec')
        	newMat = ep.transform(varespec, method='total', axis=1)
        
        Calculating Bray-Curtis dissimilarities on the new matrix::
        
        	brayMat = ep.distance(newMat, method='bray')
        
        PCA on US Arrests data::
        	
        	USArrests = ep.load_data('USArrests')
        	prcomp = ep.pca(USArrests, scaled = True)
        	prcomp.summary()
        	prcomp.biplot(scale = 0)
        	prcomp.biplot(scale = 1, obsNames = True)
        
        Full online documentation is a work in progress
        
        TO-DO
        ====
        - MINIMUM SPANNING TREE
        - PROCRUSTES ROTATION
        - LINEAR/SURFACE ENVIRONMENTAL FITTING
        - MAXENT WRAPPER
        - MANY MANY OTHER THINGS
        
Keywords: ordination,ecology,multivariate data analysis
Platform: UNKNOWN
Classifier: Development Status :: 3 - Alpha
Classifier: Intended Audience :: Science/Research
Classifier: License :: OSI Approved :: MIT License
Classifier: Programming Language :: Python :: 2.7
Classifier: Programming Language :: Python :: 3.4
