# general requirements
mappy==2.24
toml==0.10.2
tqdm>4,<5
scipy==1.10.1
numpy~=1.24.2
pysam==0.21.0
parasail==1.3.4
pandas>1,<2
requests~=2.28.2
ont-koi==0.3.0
ont-remora==2.1.3
ont-fast5-api==3.3.0
pod5==0.2.0
fast-ctc-decode==0.3.5
python-dateutil==2.8.2
edlib==1.3.9
# cuda requirements
torch~=2.0.0
