Metadata-Version: 2.1
Name: mousechd-napari
Version: 0.0.1a7
Summary: A tool for heart segmentation and congenital heart defect detection in mice.
Home-page: https://github.com/hnguyentt/mousechd-napari
Author: Hoa Nguyen
Author-email: ntthoa.uphcm@gmail.com
License: MIT
Project-URL: Bug Tracker, https://github.com/hnguyentt/mousechd-napari/issues
Project-URL: Documentation, https://github.com/hnguyentt/mousechd-napari#README.md
Project-URL: Source Code, https://github.com/hnguyentt/mousechd-napari
Project-URL: User Support, https://github.com/hnguyentt/mousechd-napari/issues
Classifier: Development Status :: 2 - Pre-Alpha
Classifier: Framework :: napari
Classifier: Intended Audience :: Developers
Classifier: License :: OSI Approved :: MIT License
Classifier: Operating System :: OS Independent
Classifier: Programming Language :: Python
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3 :: Only
Classifier: Programming Language :: Python :: 3.9
Classifier: Programming Language :: Python :: 3.10
Classifier: Topic :: Scientific/Engineering :: Image Processing
Requires-Python: >=3.9
Description-Content-Type: text/markdown
License-File: LICENSE
Requires-Dist: setuptools
Requires-Dist: packaging
Requires-Dist: mousechd
Provides-Extra: testing
Requires-Dist: tox ; extra == 'testing'
Requires-Dist: pytest ; extra == 'testing'
Requires-Dist: pytest-cov ; extra == 'testing'
Requires-Dist: pytest-qt ; extra == 'testing'
Requires-Dist: napari ; extra == 'testing'

# Napari plugin for MouseCHD project

![](https://raw.githubusercontent.com/hnguyentt/mousechd-napari/master/assets/thumbnail.png)

*Tool for heart segmentation and congenital heart defect detection in mice.*

## Installation
### From Bundle
(1) Install Napari by following this instruction https://napari.org/stable/tutorials/fundamentals/installation.html#install-as-a-bundled-app

(2) Install `mousechd-napari` plugin:
    * Run Napari
    * `Plugins` --> `Install/Uninstall Plugins ...` --> Search for `mousechd_napari` --> Click on `install`.

(3) Restart Napari to run the plugin

### From code
```bash
conda create -n mousechd_napari python=3.9
pip install "napari[all]"
pip install mousechd_napari
napari
```

## How to use

Please find details instruction in folder [docs](https://github.com/hnguyentt/mousechd-napari/tree/master/docs)
