license.md
pyproject.toml
readme.md
setup.cfg
setup.manifest
setup.py
lumicks.pylake.egg-info/PKG-INFO
lumicks.pylake.egg-info/SOURCES.txt
lumicks.pylake.egg-info/dependency_links.txt
lumicks.pylake.egg-info/not-zip-safe
lumicks.pylake.egg-info/requires.txt
lumicks.pylake.egg-info/top_level.txt
lumicks/pylake/__about__.py
lumicks/pylake/__init__.py
lumicks/pylake/adjustments.py
lumicks/pylake/benchmark.py
lumicks/pylake/calibration.py
lumicks/pylake/channel.py
lumicks/pylake/conftest.py
lumicks/pylake/fdcurve.py
lumicks/pylake/fdensemble.py
lumicks/pylake/file.py
lumicks/pylake/file_download.py
lumicks/pylake/group.py
lumicks/pylake/image_stack.py
lumicks/pylake/kymo.py
lumicks/pylake/marker.py
lumicks/pylake/note.py
lumicks/pylake/point_scan.py
lumicks/pylake/scalebar.py
lumicks/pylake/scan.py
lumicks/pylake/detail/__init__.py
lumicks/pylake/detail/alignment.py
lumicks/pylake/detail/confocal.py
lumicks/pylake/detail/h5_helper.py
lumicks/pylake/detail/image.py
lumicks/pylake/detail/imaging_mixins.py
lumicks/pylake/detail/mixin.py
lumicks/pylake/detail/plotting.py
lumicks/pylake/detail/timeindex.py
lumicks/pylake/detail/utilities.py
lumicks/pylake/detail/widefield.py
lumicks/pylake/detail/tests/test_plotting.py
lumicks/pylake/detail/tests/test_widefield.py
lumicks/pylake/fitting/__init__.py
lumicks/pylake/fitting/datasets.py
lumicks/pylake/fitting/fit.py
lumicks/pylake/fitting/fitdata.py
lumicks/pylake/fitting/model.py
lumicks/pylake/fitting/models.py
lumicks/pylake/fitting/parameter_trace.py
lumicks/pylake/fitting/parameters.py
lumicks/pylake/fitting/profile_likelihood.py
lumicks/pylake/fitting/detail/__init__.py
lumicks/pylake/fitting/detail/derivative_manipulation.py
lumicks/pylake/fitting/detail/link_functions.py
lumicks/pylake/fitting/detail/model_implementation.py
lumicks/pylake/fitting/detail/utilities.py
lumicks/pylake/fitting/tests/__init__.py
lumicks/pylake/fitting/tests/test_condition_handling.py
lumicks/pylake/fitting/tests/test_fd_models.py
lumicks/pylake/fitting/tests/test_fit.py
lumicks/pylake/fitting/tests/test_model_composition.py
lumicks/pylake/fitting/tests/test_model_sim.py
lumicks/pylake/fitting/tests/test_parameter_inversion.py
lumicks/pylake/fitting/tests/test_parameters.py
lumicks/pylake/fitting/tests/test_pickling.py
lumicks/pylake/fitting/tests/test_profiles.py
lumicks/pylake/fitting/tests/test_stderr.py
lumicks/pylake/fitting/tests/test_stepping.py
lumicks/pylake/fitting/tests/test_utilities.py
lumicks/pylake/force_calibration/__init__.py
lumicks/pylake/force_calibration/calibration_models.py
lumicks/pylake/force_calibration/convenience.py
lumicks/pylake/force_calibration/power_spectrum.py
lumicks/pylake/force_calibration/power_spectrum_calibration.py
lumicks/pylake/force_calibration/touchdown.py
lumicks/pylake/force_calibration/detail/__init__.py
lumicks/pylake/force_calibration/detail/drag_models.py
lumicks/pylake/force_calibration/detail/driving_input.py
lumicks/pylake/force_calibration/detail/hydrodynamics.py
lumicks/pylake/force_calibration/detail/power_models.py
lumicks/pylake/force_calibration/tests/__init__.py
lumicks/pylake/force_calibration/tests/conftest.py
lumicks/pylake/force_calibration/tests/test_active_calibration.py
lumicks/pylake/force_calibration/tests/test_axial.py
lumicks/pylake/force_calibration/tests/test_convenience.py
lumicks/pylake/force_calibration/tests/test_diode_models.py
lumicks/pylake/force_calibration/tests/test_driving_input.py
lumicks/pylake/force_calibration/tests/test_hydro.py
lumicks/pylake/force_calibration/tests/test_power_model.py
lumicks/pylake/force_calibration/tests/test_power_spectrum.py
lumicks/pylake/force_calibration/tests/test_power_spectrum_calibration.py
lumicks/pylake/force_calibration/tests/test_simulations.py
lumicks/pylake/force_calibration/tests/test_touchdown.py
lumicks/pylake/force_calibration/tests/data/__init__.py
lumicks/pylake/force_calibration/tests/data/reference_spectrum.npz
lumicks/pylake/force_calibration/tests/data/simulate_calibration_data.py
lumicks/pylake/force_calibration/tests/data/simulate_ideal.py
lumicks/pylake/kymotracker/__init__.py
lumicks/pylake/kymotracker/kymotrack.py
lumicks/pylake/kymotracker/kymotracker.py
lumicks/pylake/kymotracker/stitching.py
lumicks/pylake/kymotracker/detail/__init__.py
lumicks/pylake/kymotracker/detail/denoising.py
lumicks/pylake/kymotracker/detail/gaussian_mle.py
lumicks/pylake/kymotracker/detail/geometry_2d.py
lumicks/pylake/kymotracker/detail/linalg_2d.py
lumicks/pylake/kymotracker/detail/localization_models.py
lumicks/pylake/kymotracker/detail/msd_estimation.py
lumicks/pylake/kymotracker/detail/peakfinding.py
lumicks/pylake/kymotracker/detail/scoring_functions.py
lumicks/pylake/kymotracker/detail/sequence.py
lumicks/pylake/kymotracker/detail/stitch.py
lumicks/pylake/kymotracker/detail/trace_line_2d.py
lumicks/pylake/kymotracker/tests/__init__.py
lumicks/pylake/kymotracker/tests/conftest.py
lumicks/pylake/kymotracker/tests/test_algorithm_scaling.py
lumicks/pylake/kymotracker/tests/test_denoise.py
lumicks/pylake/kymotracker/tests/test_gaussian_mle.py
lumicks/pylake/kymotracker/tests/test_geometry_2d.py
lumicks/pylake/kymotracker/tests/test_greedy_algorithm.py
lumicks/pylake/kymotracker/tests/test_image_sampling.py
lumicks/pylake/kymotracker/tests/test_io.py
lumicks/pylake/kymotracker/tests/test_kymotrack.py
lumicks/pylake/kymotracker/tests/test_kymotrackgroup_sources.py
lumicks/pylake/kymotracker/tests/test_lines_algorithm.py
lumicks/pylake/kymotracker/tests/test_loc_models.py
lumicks/pylake/kymotracker/tests/test_peakfinding.py
lumicks/pylake/kymotracker/tests/test_refinement.py
lumicks/pylake/kymotracker/tests/test_sequence.py
lumicks/pylake/kymotracker/tests/test_stitching.py
lumicks/pylake/kymotracker/tests/test_tracing.py
lumicks/pylake/kymotracker/tests/data/csv_bad_format.csv
lumicks/pylake/kymotracker/tests/data/csv_unparseable.csv
lumicks/pylake/kymotracker/tests/data/gaussian_data_1d.npz
lumicks/pylake/kymotracker/tests/data/generate_gaussian_data.py
lumicks/pylake/kymotracker/tests/data/kymo_data_2lines.npz
lumicks/pylake/kymotracker/tests/data/test_sequence.gb
lumicks/pylake/kymotracker/tests/data/test_sequence_corrupted.gb
lumicks/pylake/kymotracker/tests/data/test_sequence_no_features.gb
lumicks/pylake/kymotracker/tests/data/tracks_v0.csv
lumicks/pylake/kymotracker/tests/data/tracks_v1.csv
lumicks/pylake/kymotracker/tests/data/tracks_v2.csv
lumicks/pylake/kymotracker/tests/data/tracks_v3.csv
lumicks/pylake/kymotracker/tests/data/tracks_v4.csv
lumicks/pylake/kymotracker/tests/data/two_gaussians_1d.npz
lumicks/pylake/kymotracker/tests/reference_data/denoising_basic/output_image_1d.npz
lumicks/pylake/kymotracker/tests/reference_data/denoising_basic/output_image_2d.npz
lumicks/pylake/kymotracker/tests/reference_data/denoising_regularized/1d_background.npz
lumicks/pylake/kymotracker/tests/reference_data/denoising_regularized/1d_no_background.npz
lumicks/pylake/kymotracker/tests/reference_data/denoising_regularized/2d_background.npz
lumicks/pylake/kymotracker/tests/reference_data/denoising_regularized/2d_no_background.npz
lumicks/pylake/kymotracker/tests/test_derived_quantities/__init__.py
lumicks/pylake/kymotracker/tests/test_derived_quantities/test_msd.py
lumicks/pylake/nb_widgets/__init__.py
lumicks/pylake/nb_widgets/correlated_plot.py
lumicks/pylake/nb_widgets/image_editing.py
lumicks/pylake/nb_widgets/kymotracker_widgets.py
lumicks/pylake/nb_widgets/range_selector.py
lumicks/pylake/nb_widgets/detail/__init__.py
lumicks/pylake/nb_widgets/detail/mouse.py
lumicks/pylake/nb_widgets/detail/undostack.py
lumicks/pylake/nb_widgets/tests/__init__.py
lumicks/pylake/nb_widgets/tests/conftest.py
lumicks/pylake/nb_widgets/tests/test_correlated_plot.py
lumicks/pylake/nb_widgets/tests/test_fd_selector.py
lumicks/pylake/nb_widgets/tests/test_image_editing.py
lumicks/pylake/nb_widgets/tests/test_kymotracker_widget.py
lumicks/pylake/nb_widgets/tests/test_mouse.py
lumicks/pylake/nb_widgets/tests/test_undostack.py
lumicks/pylake/piezo_tracking/__init__.py
lumicks/pylake/piezo_tracking/baseline.py
lumicks/pylake/piezo_tracking/piezo_tracking.py
lumicks/pylake/piezo_tracking/tests/conftest.py
lumicks/pylake/piezo_tracking/tests/test_baseline.py
lumicks/pylake/piezo_tracking/tests/test_piezo_tracking.py
lumicks/pylake/population/__init__.py
lumicks/pylake/population/dwelltime.py
lumicks/pylake/population/mixture.py
lumicks/pylake/population/tests/__init__.py
lumicks/pylake/population/tests/conftest.py
lumicks/pylake/population/tests/test_dwelltimes.py
lumicks/pylake/population/tests/test_mixture.py
lumicks/pylake/population/tests/data/exponential_data.npz
lumicks/pylake/population/tests/data/generate_exponential_data.py
lumicks/pylake/population/tests/data/generate_trace_data.py
lumicks/pylake/population/tests/data/trace_data.npz
lumicks/pylake/simulation/__init__.py
lumicks/pylake/simulation/diffusion.py
lumicks/pylake/simulation/tests/__init__.py
lumicks/pylake/simulation/tests/test_diffusion.py
lumicks/pylake/tests/__init__.py
lumicks/pylake/tests/conftest.py
lumicks/pylake/tests/test_fdcurve.py
lumicks/pylake/tests/test_fdensemble.py
lumicks/pylake/tests/test_file_download.py
lumicks/pylake/tests/test_image.py
lumicks/pylake/tests/test_imaging_mixins.py
lumicks/pylake/tests/test_import_time.py
lumicks/pylake/tests/test_mixin.py
lumicks/pylake/tests/test_scalebar.py
lumicks/pylake/tests/test_timeindex.py
lumicks/pylake/tests/test_utilities.py
lumicks/pylake/tests/data/__init__.py
lumicks/pylake/tests/data/mock_confocal.py
lumicks/pylake/tests/data/mock_fdcurve.py
lumicks/pylake/tests/data/mock_file.py
lumicks/pylake/tests/data/mock_json.py
lumicks/pylake/tests/data/mock_widefield.py
lumicks/pylake/tests/data/test_mock_confocal.py
lumicks/pylake/tests/reference_data/freezing/dict[1].npz
lumicks/pylake/tests/reference_data/freezing/dict[2].npz
lumicks/pylake/tests/reference_data/freezing/forced_filename_1.npz
lumicks/pylake/tests/reference_data/freezing/forced_filename_2.npz
lumicks/pylake/tests/reference_data/freezing/freezing[1].npz
lumicks/pylake/tests/reference_data/freezing/freezing[2].npz
lumicks/pylake/tests/reference_data/freezing/mytest[1].npz
lumicks/pylake/tests/reference_data/freezing/mytest[2].npz
lumicks/pylake/tests/reference_data/freezing/non_ndarray_matrix[1].npz
lumicks/pylake/tests/reference_data/freezing/non_ndarray_matrix[2].npz
lumicks/pylake/tests/reference_data/freezing/ragged[1].npz
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lumicks/pylake/tests/test_channels/__init__.py
lumicks/pylake/tests/test_channels/conftest.py
lumicks/pylake/tests/test_channels/test_arithmetic.py
lumicks/pylake/tests/test_channels/test_channels.py
lumicks/pylake/tests/test_file/__init__.py
lumicks/pylake/tests/test_file/conftest.py
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lumicks/pylake/tests/test_file/test_file_items.py
lumicks/pylake/tests/test_imaging_camera/__init__.py
lumicks/pylake/tests/test_imaging_camera/conftest.py
lumicks/pylake/tests/test_imaging_camera/test_export.py
lumicks/pylake/tests/test_imaging_camera/test_image_reconstruction.py
lumicks/pylake/tests/test_imaging_camera/test_image_stack.py
lumicks/pylake/tests/test_imaging_confocal/__init__.py
lumicks/pylake/tests/test_imaging_confocal/conftest.py
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lumicks/pylake/tests/test_imaging_confocal/test_export.py
lumicks/pylake/tests/test_imaging_confocal/test_kymo.py
lumicks/pylake/tests/test_imaging_confocal/test_kymo_downsampling.py
lumicks/pylake/tests/test_imaging_confocal/test_kymo_from_array.py
lumicks/pylake/tests/test_imaging_confocal/test_kymo_from_imagestack.py
lumicks/pylake/tests/test_imaging_confocal/test_kymo_plotting.py
lumicks/pylake/tests/test_imaging_confocal/test_kymo_slice_crop.py
lumicks/pylake/tests/test_imaging_confocal/test_kymo_transforms.py
lumicks/pylake/tests/test_imaging_confocal/test_plotting.py
lumicks/pylake/tests/test_imaging_confocal/test_point_scan.py
lumicks/pylake/tests/test_imaging_confocal/test_scan.py
lumicks/pylake/tests/test_imaging_confocal/test_scan_slice_crop.py