Metadata-Version: 1.1
Name: pygdc
Version: 0.0.2
Summary: Python API for Genomic Data Commons
Home-page: UNKNOWN
Author: UNKNOWN
Author-email: UNKNOWN
License: http://www.apache.org/licenses/LICENSE-2.0.html
Description: PyGDC
        =====
        
        Python API for accessing Genomic Data Commons
        
        Basic API
        ~~~~~~~~~
        
        Cases
        ^^^^^
        
        .. code:: python
        
            from pygdc import get_cases
            from pygdc.filters import equals_filter
        
        
            results = get_cases(
                filters=equals_filter('project.primary_site', 'Lung'), 
                fields='demographic.gender,project.disease_type', 
                max_results=50
            )
        
        Cohorts Example
        ~~~~~~~~~~~~~~~
        
        Using `cohorts <http://github.com/hammerlab/cohorts>`__
        
        .. code:: python
        
            import pygdc
        
            pygdc.build_cohort(
                primary_site='Lung', 
                cohort_cache_dir='cache-dir')
        
Platform: UNKNOWN
Classifier: Development Status :: 3 - Alpha
Classifier: Environment :: Console
Classifier: Operating System :: OS Independent
Classifier: Intended Audience :: Science/Research
Classifier: License :: OSI Approved :: Apache Software License
Classifier: Programming Language :: Python
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
