LICENSE.md
README.md
pyproject.toml
setup.py
spatialprofilingtoolbox/__init__.py
spatialprofilingtoolbox/version.txt
spatialprofilingtoolbox.egg-info/PKG-INFO
spatialprofilingtoolbox.egg-info/SOURCES.txt
spatialprofilingtoolbox.egg-info/dependency_links.txt
spatialprofilingtoolbox.egg-info/requires.txt
spatialprofilingtoolbox.egg-info/top_level.txt
spatialprofilingtoolbox/applications/__init__.py
spatialprofilingtoolbox/applications/cell_cartoons/__init__.py
spatialprofilingtoolbox/applications/cell_cartoons/application.py
spatialprofilingtoolbox/applications/diffusion_graphs_viz/__init__.py
spatialprofilingtoolbox/applications/diffusion_graphs_viz/diffusion_graphs_viz.py
spatialprofilingtoolbox/applications/diffusion_tests_viz/__init__.py
spatialprofilingtoolbox/applications/diffusion_tests_viz/diffusion_tests_viz.py
spatialprofilingtoolbox/applications/front_proximity_viz/__init__.py
spatialprofilingtoolbox/applications/front_proximity_viz/front_proximity_viz.py
spatialprofilingtoolbox/dataset_designs/__init__.py
spatialprofilingtoolbox/dataset_designs/multiplexed_imaging/__init__.py
spatialprofilingtoolbox/dataset_designs/multiplexed_imaging/halo_areas_provider.py
spatialprofilingtoolbox/dataset_designs/multiplexed_imaging/halo_cell_metadata_design.py
spatialprofilingtoolbox/dataset_designs/multiplexed_imaging/halo_cell_metadata_provider.py
spatialprofilingtoolbox/environment/__init__.py
spatialprofilingtoolbox/environment/cell_metadata.py
spatialprofilingtoolbox/environment/computational_design.py
spatialprofilingtoolbox/environment/configuration.py
spatialprofilingtoolbox/environment/database_context_utility.py
spatialprofilingtoolbox/environment/job_generator.py
spatialprofilingtoolbox/environment/log_formats.py
spatialprofilingtoolbox/environment/pipeline_design.py
spatialprofilingtoolbox/environment/settings_wrappers.py
spatialprofilingtoolbox/environment/single_job_analyzer.py
spatialprofilingtoolbox/scripts/spt-analyze-results
spatialprofilingtoolbox/scripts/spt-cell-phenotype-proximity-analysis
spatialprofilingtoolbox/scripts/spt-diffusion-analysis
spatialprofilingtoolbox/scripts/spt-diffusion-graphs-viz
spatialprofilingtoolbox/scripts/spt-diffusion-viz
spatialprofilingtoolbox/scripts/spt-frequency-analysis
spatialprofilingtoolbox/scripts/spt-front-proximity-analysis
spatialprofilingtoolbox/scripts/spt-front-proximity-viz
spatialprofilingtoolbox/scripts/spt-generate-jobs
spatialprofilingtoolbox/scripts/spt-pipeline
spatialprofilingtoolbox/scripts/spt-print
spatialprofilingtoolbox/workflows/__init__.py
spatialprofilingtoolbox/workflows/diffusion/__init__.py
spatialprofilingtoolbox/workflows/diffusion/analyzer.py
spatialprofilingtoolbox/workflows/diffusion/computational_design.py
spatialprofilingtoolbox/workflows/diffusion/core.py
spatialprofilingtoolbox/workflows/diffusion/integrator.py
spatialprofilingtoolbox/workflows/diffusion/job_generator.py
spatialprofilingtoolbox/workflows/frequency/__init__.py
spatialprofilingtoolbox/workflows/frequency/analyzer.py
spatialprofilingtoolbox/workflows/frequency/computational_design.py
spatialprofilingtoolbox/workflows/frequency/core.py
spatialprofilingtoolbox/workflows/frequency/data_logging.py
spatialprofilingtoolbox/workflows/frequency/integrator.py
spatialprofilingtoolbox/workflows/frequency/job_generator.py
spatialprofilingtoolbox/workflows/front_proximity/__init__.py
spatialprofilingtoolbox/workflows/front_proximity/analyzer.py
spatialprofilingtoolbox/workflows/front_proximity/computational_design.py
spatialprofilingtoolbox/workflows/front_proximity/core.py
spatialprofilingtoolbox/workflows/front_proximity/integrator.py
spatialprofilingtoolbox/workflows/front_proximity/job_generator.py
spatialprofilingtoolbox/workflows/phenotype_proximity/__init__.py
spatialprofilingtoolbox/workflows/phenotype_proximity/analyzer.py
spatialprofilingtoolbox/workflows/phenotype_proximity/computational_design.py
spatialprofilingtoolbox/workflows/phenotype_proximity/core.py
spatialprofilingtoolbox/workflows/phenotype_proximity/integrator.py
spatialprofilingtoolbox/workflows/phenotype_proximity/job_generator.py