MANIFEST.in
Makefile
README.rst
setup.py
examples/snake-data.txt
examples/snake-map.txt
phyde/__init__.py
phyde.egg-info/PKG-INFO
phyde.egg-info/SOURCES.txt
phyde.egg-info/dependency_links.txt
phyde.egg-info/not-zip-safe
phyde.egg-info/top_level.txt
phyde/analyze/__init__.py
phyde/analyze/main.py
phyde/core/__init__.py
phyde/core/bootstrap.py
phyde/core/data.cpp
phyde/core/data.pyx
phyde/core/result.py
phyde/visualize/__init__.py
phyde/visualize/viz.py
scripts/bootstrap_hyde.py
scripts/bootstrap_hyde_mp.py
scripts/individual_hyde.py
scripts/individual_hyde_mp.py
scripts/run_hyde.py
scripts/run_hyde_mp.py
src/HyDe.cpp
src/HyDe.hpp
src/Makefile
src/MbRandom.cpp
src/MbRandom.hpp
src/main.cpp
test/data.txt
test/map.txt
test/test.py
test/triples.txt