Metadata-Version: 2.1
Name: rnanorm
Version: 1.0.0
Summary: Normalization of RNA-seq gene expression
Home-page: UNKNOWN
License: UNKNOWN
Author: Genialis, Inc.
Author-email: miha@genialis.com
Description-Content-Type: text/markdown
Requires-Dist: pandas~=1.0.1
Requires-Dist: black
Requires-Dist: isort
Requires-Dist: flake8
Requires-Dist: pytest ; extra == "test"
Provides-Extra: test

Normalization of RNA-seq gen expression. Supported methods: Transcript per kilobase million (TPM) and Counts per million (CPM).

# Usage

Install `rnanorm` Python package for development:

```
flit install
```

Run `rnanorm` command line tool:

```
rnanorm gene_expressions.tsv gene_lengths.tsv
```

# Contributing

Install `rnanorm` Python package for development:

```
flit install --symlink
```

Run all tests:

```
tox
```

Run linters:

```
tox -e linters
```

