CONTRIBUTING.md
LICENSE
MANIFEST.in
README.md
setup.cfg
setup.py
cellpack/__init__.py
cellpack.egg-info/PKG-INFO
cellpack.egg-info/SOURCES.txt
cellpack.egg-info/dependency_links.txt
cellpack.egg-info/entry_points.txt
cellpack.egg-info/not-zip-safe
cellpack.egg-info/requires.txt
cellpack.egg-info/top_level.txt
cellpack/autopack/AWSHandler.py
cellpack/autopack/Analysis.py
cellpack/autopack/BaseGrid.py
cellpack/autopack/Compartment.py
cellpack/autopack/DBRecipeHandler.py
cellpack/autopack/Environment.py
cellpack/autopack/FirebaseHandler.py
cellpack/autopack/GeometryTools.py
cellpack/autopack/Gradient.py
cellpack/autopack/Graphics.py
cellpack/autopack/Grid.py
cellpack/autopack/IOutils.py
cellpack/autopack/MeshStore.py
cellpack/autopack/OutputSimularium.py
cellpack/autopack/Recipe.py
cellpack/autopack/Serializable.py
cellpack/autopack/__init__.py
cellpack/autopack/binvox_rw.py
cellpack/autopack/ldSequence.py
cellpack/autopack/octree.py
cellpack/autopack/plotly_result.py
cellpack/autopack/randomRot.py
cellpack/autopack/ray.py
cellpack/autopack/trajectory.py
cellpack/autopack/transformation.py
cellpack/autopack/utils.py
cellpack/autopack/ingredient/Ingredient.py
cellpack/autopack/ingredient/__init__.py
cellpack/autopack/ingredient/agent.py
cellpack/autopack/ingredient/grow.py
cellpack/autopack/ingredient/multi_cylinder.py
cellpack/autopack/ingredient/multi_sphere.py
cellpack/autopack/ingredient/single_cube.py
cellpack/autopack/ingredient/single_cylinder.py
cellpack/autopack/ingredient/single_sphere.py
cellpack/autopack/ingredient/utils.py
cellpack/autopack/interface_objects/__init__.py
cellpack/autopack/interface_objects/database_ids.py
cellpack/autopack/interface_objects/default_values.py
cellpack/autopack/interface_objects/gradient_data.py
cellpack/autopack/interface_objects/ingredient_types.py
cellpack/autopack/interface_objects/meta_enum.py
cellpack/autopack/interface_objects/packed_objects.py
cellpack/autopack/interface_objects/partners.py
cellpack/autopack/interface_objects/representations.py
cellpack/autopack/loaders/__init__.py
cellpack/autopack/loaders/analysis_config_loader.py
cellpack/autopack/loaders/config_loader.py
cellpack/autopack/loaders/migrate_v1_to_v2.py
cellpack/autopack/loaders/migrate_v2_to_v2_1.py
cellpack/autopack/loaders/recipe_loader.py
cellpack/autopack/loaders/utils.py
cellpack/autopack/loaders/v1_v2_attribute_changes.py
cellpack/autopack/upy/__init__.py
cellpack/autopack/upy/colors.py
cellpack/autopack/upy/hostHelper.py
cellpack/autopack/upy/simularium/__init__.py
cellpack/autopack/upy/simularium/simularium_helper.py
cellpack/autopack/writers/ImageWriter.py
cellpack/autopack/writers/__init__.py
cellpack/bin/__init__.py
cellpack/bin/analyze.py
cellpack/bin/cleanup_tasks.py
cellpack/bin/get-pdb-offset.py
cellpack/bin/pack.py
cellpack/bin/simularium_converter.py
cellpack/bin/upload.py
docs/Makefile
docs/conf.py
docs/contributing.rst
docs/index.rst
docs/installation.rst
docs/make.bat
docs/modules.rst
docs/recipe-schema.rst