
import numpy as np

from scipy import stats, special, optimize
import statsmodels.api as sm
from statsmodels.miscmodels import TLinearModel

#Example:
#np.random.seed(98765678)
nobs = 50
nvars = 6
df = 3
rvs = np.random.randn(nobs, nvars-1)
data_exog = sm.add_constant(rvs)
xbeta = 0.9 + 0.1*rvs.sum(1)
data_endog = xbeta + 0.1*np.random.standard_t(df, size=nobs)
print 'variance of endog:', data_endog.var()
print 'true parameters:', [0.1]*nvars + [0.9]

res_ols = sm.OLS(data_endog, data_exog).fit()
print '\nResults with ols'
print   '----------------'
print res_ols.scale
print np.sqrt(res_ols.scale)
print res_ols.params
print res_ols.bse
kurt = stats.kurtosis(res_ols.resid)
df_fromkurt = 6./kurt + 4
print 'df_fromkurt from ols residuals', df_fromkurt
print stats.t.stats(df_fromkurt, moments='mvsk')
print stats.t.stats(df, moments='mvsk')

modp = TLinearModel(data_endog, data_exog)
start_value = 0.1*np.ones(data_exog.shape[1]+2)
#start_value = np.zeros(data_exog.shape[1]+2)
#start_value[:nvars] = sm.OLS(data_endog, data_exog).fit().params
start_value[:nvars] = res_ols.params
start_value[-2] = df_fromkurt #10
start_value[-1] = np.sqrt(res_ols.scale) #0.5
modp.start_params = start_value

#adding fixed parameters

fixdf = np.nan * np.zeros(modp.start_params.shape)
fixdf[-2] = 5

fixone = 0
if fixone:
    modp.fixed_params = fixdf
    modp.fixed_paramsmask = np.isnan(fixdf)
    modp.start_params = modp.start_params[modp.fixed_paramsmask]
else:
    modp.fixed_params = None
    modp.fixed_paramsmask = None


print '\nResults with TLinearModel'
print   '-------------------------'
resp = modp.fit(start_params = modp.start_params, disp=1, method='nm',
                maxfun=10000, maxiter=5000)#'newton')
#resp = modp.fit(start_params = modp.start_params, disp=1, method='newton')

print 'using Nelder-Mead'
print resp.params
print resp.bse
resp2 = modp.fit(start_params = resp.params, method='Newton')
print 'using Newton'
print resp2.params
print resp2.bse

from statsmodels.sandbox.regression.numdiff import approx_fprime1, approx_hess

hb=-approx_hess(modp.start_params, modp.loglike, epsilon=-1e-4)[0]
tmp = modp.loglike(modp.start_params)
print tmp.shape
print 'eigenvalues of numerical Hessian'
print np.linalg.eigh(np.linalg.inv(hb))[0]

#store_params is only available in original test script
##pp=np.array(store_params)
##print pp.min(0)
##print pp.max(0)


