.pre-commit-config.yaml
CHANGELOG.md
CODE_OF_CONDUCT.md
CONTRIBUTING.md
LICENSE
README.md
codecov.yml
mkdocs.yml
pyproject.toml
.github/workflows/docs.yml
.github/workflows/lint.yml
.github/workflows/publish.yml
.github/workflows/tests.yml
data/README.md
data/TMT10-Trial-8.mgf
data/TMT10-Trial-8.mzML
data/TMT10-Trial-8.mzXML
depthcharge/__init__.py
depthcharge/constants.py
depthcharge/feedforward.py
depthcharge/mixins.py
depthcharge/primitives.py
depthcharge/testing.py
depthcharge/utils.py
depthcharge/version.py
depthcharge/data/__init__.py
depthcharge/data/analyte_datasets.py
depthcharge/data/arrow.py
depthcharge/data/fields.py
depthcharge/data/parsers.py
depthcharge/data/preprocessing.py
depthcharge/data/spectrum_datasets.py
depthcharge/encoders/__init__.py
depthcharge/encoders/sinusoidal.py
depthcharge/tokenizers/__init__.py
depthcharge/tokenizers/molecules.py
depthcharge/tokenizers/peptides.py
depthcharge/tokenizers/tokenizer.py
depthcharge/transformers/__init__.py
depthcharge/transformers/analytes.py
depthcharge/transformers/spectra.py
depthcharge_ms.egg-info/PKG-INFO
depthcharge_ms.egg-info/SOURCES.txt
depthcharge_ms.egg-info/dependency_links.txt
depthcharge_ms.egg-info/requires.txt
depthcharge_ms.egg-info/top_level.txt
docs/CHANGELOG.md
docs/CODE_OF_CONDUCT.md
docs/CONTRIBUTING.md
docs/index.md
docs/static
docs/api/datasets.md
docs/api/encoders.md
docs/api/index.md
docs/api/primitives.md
docs/api/tokenizers.md
docs/api/transformers.md
docs/getting-started/installation.md
docs/stylesheets/extra.css
static/icon.svg
static/logo-dark.png
static/logo-light.png
tests/conftest.py
tests/unit_tests/test_feedforward.py
tests/unit_tests/test_primitives.py
tests/unit_tests/test_testing.py
tests/unit_tests/test_version.py
tests/unit_tests/test_data/test_arrow.py
tests/unit_tests/test_data/test_datasets.py
tests/unit_tests/test_data/test_loaders.py
tests/unit_tests/test_data/test_parsers.py
tests/unit_tests/test_encoders/test_sinusoidal.py
tests/unit_tests/test_tokenizers/test_molecules.py
tests/unit_tests/test_tokenizers/test_peptides.py
tests/unit_tests/test_transformers/test_analyte_transformers.py
tests/unit_tests/test_transformers/test_spectrum_transformers.py