
pytram changelog
================

Version 0.1.0 (Alpha):

    Implemented the dTRAM estimator, nosetests, and a dTRAM example (iPython notebook).

Version 0.1.1 (Alpha):

    Added a second example for dTRAM. Added docstrings for DTRAM and the API function.

Version 0.1.2 (Alpha):

    Added the TRAMData class for easy input data preparation. Adapted API and dTRAM example.
    Added new dTRAM API function for simple use of TRAMData. Changed dTRAM dependency from
    reweighting factors to bias energies. Added method for transition matrix of a given
    thermodynamic state.

Version 0.1.3 (Alpha):

    Added the Reader class for easy input data import. Added run script for dTRAM.
    Added u_I_x generators. in TRAMData for use with xTRAM.
    
Version 0.1.4 (Alpha):

    Added xTRAM estimator, API, runscript, tests
    Added documentation.
    Minor bug fixes.
    
Version 0.1.5 (Alpha):

    Preparation for pypi

Version 0.1.6 (Beta)

    Added verbosity to TRAMData. Binning bugfix in xTRAM. Fixed None comparisons in dTRAM.

Version 0.1.7 (Beta)

    Added stationary property getters to Estimator. Removed unsafe setters from Estimator classes.
    Added kT switch in TRAMData. Moved sanity checks to Estimator classes' constructors.
    Standardised verbose printouts.

Version 0.2.0 (Beta)

    Introducing logsumexp summation scheme fro dTRAM. Interface cleanup (uniform getters, citation,
    naming conventions).

Version 0.2.1 (Beta)
    
    Fix compilation under MS Visual Studio. Refactoring API functions: use _from_matrix instead
    of _me versions.
