Metadata-Version: 1.1
Name: clinical_research_study_manager
Version: 1.2.2.dev1
Summary: Program to manage some common clinical research tasks from the command line
Home-page: https://github.com/SethPitts/clinical_research_study_manager
Author: Seth Pitts
Author-email: sethpitts22@gmail.com
License: MIT
Description: Clinical Research Study Manager
        ===============================
        
        Program to manage some common clinical research task from the command
        line
        
        Getting Started
        ---------------
        
        This program requires python 3 and a few external packages.
        
        Prerequisites
        ~~~~~~~~~~~~~
        
        Requires python and above
        
        ::
        
            $ python 3.5
        
        
            $ pip install openpyxl
            $ pip install pandas
            $ pip install numpy
            $ pip install matplotlib
        
        Installing
        ~~~~~~~~~~
        
        ::
        
            $ pip install clinical_research_study_manager
        
        Get Help
        
        ::
        
            $ clinical_research_study_manager -h
            optional arguments:
              -h, --help            show this help message and exit
              -create_project Project_Name
                                    Creates a new project titled Project_Name in the
                                    Projects directory
              -load_project Project_Name
                                    Loads Project Project_Name from the Projects directory
                                    for study activities
              -list_projects        List available projects to load
        
        Create New Project
        
        ::
        
            $ clinical_reseaerch_study_manager -create_project Testing
            Creating new project titled Testing
            Created patient_data[phi] for project Testing at /home/beliefs22/Clinical_Research_Manager_Projects/Projects/Testing
            Created patient_data[de_identified] for project Testing at /home/beliefs22/Clinical_Research_Manager_Projects/Projects/Testing
            Created logs for project Testing at /home/beliefs22/Clinical_Research_Manager_Projects/Projects/Testing
            Created logs/logs_with_phi for project Testing at /home/beliefs22/Clinical_Research_Manager_Projects/Projects/Testing
            Created data_visualization for project Testing at /home/beliefs22/Clinical_Research_Manager_Projects/Projects/Testing
            Created log files for project Testing
            Created Screening_Log.xlsx log for Testing at /home/beliefs22/Clinical_Research_Manager_Projects/Projects/Testing/logs/Screening_Log.xlsx
            Created Master_Linking_Log.xlsx log for Testing at /home/beliefs22/Clinical_Research_Manager_Projects/Projects/Testing/logs/logs_with_phi/Master_Linking_Log.xlsx
            Created Follow_Up_Log.xlsx log for Testing at /home/beliefs22/Clinical_Research_Manager_Projects/Projects/Testing/logs/Follow_Up_Log.xlsx
            Created Enrollment_Log.xlsx log for Testing at /home/beliefs22/Clinical_Research_Manager_Projects/Projects/Testing/logs/Enrollment_Log.xl
        
        Load Specific Project
        
        ::
        
        
            $ clinical_research_study_manager -load_project Testing
            Opening Testing
            1. Manage Logs
            2. Query Logs
            Please choose what actions you would like to take, q to quit.
        
        List Available Projects
        
        ::
        
            $ clinical_research_study_manager -list_projects
            Current Projects are:
            1 : Testing
        
        Running the tests
        -----------------
        
        Coming Soon
        
        Break down into end to end tests
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        
        Explain what these tests test and why
        
        ::
        
            Coming Soon
        
        And coding style tests
        ~~~~~~~~~~~~~~~~~~~~~~
        
        Coming Soon
        
        ::
        
            Coming Soon
        
        Authors
        -------
        
        **Seth Pitts**
        
        License
        -------
        
        This project is licensed under the MIT License - see the `LICENSE.txt`_
        file for details
        
        .. _LICENSE.txt: LICENSE.txt
Keywords: clinical research data management
Platform: UNKNOWN
Classifier: Development Status :: 3 - Alpha
Classifier: Intended Audience :: Developers
Classifier: Topic :: Software Development
Classifier: License :: OSI Approved :: MIT License
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3.3
Classifier: Programming Language :: Python :: 3.4
Classifier: Programming Language :: Python :: 3.5
