LICENSE.md
MANIFEST.in
README.md
pyproject.toml
setup.py
Simba_UW_tf_dev.egg-info/PKG-INFO
Simba_UW_tf_dev.egg-info/SOURCES.txt
Simba_UW_tf_dev.egg-info/dependency_links.txt
Simba_UW_tf_dev.egg-info/entry_points.txt
Simba_UW_tf_dev.egg-info/requires.txt
Simba_UW_tf_dev.egg-info/top_level.txt
simba/.DS_Store
simba/SimBA.py
simba/__init__.py
simba/requirements.txt
simba/assets/.DS_Store
simba/assets/TheGoldenLab.PNG
simba/assets/UbuntuMono-Regular.ttf
simba/assets/dash_simba_base.css
simba/assets/icons/.DS_Store
simba/assets/icons/SimBA_logo.icns
simba/assets/icons/SimBA_logo.ico
simba/assets/icons/SimBA_logo.png
simba/assets/icons/about.png
simba/assets/icons/add_on.png
simba/assets/icons/boris.png
simba/assets/icons/browse.png
simba/assets/icons/calipher.png
simba/assets/icons/change.png
simba/assets/icons/clahe.png
simba/assets/icons/clean.png
simba/assets/icons/clf.png
simba/assets/icons/clf_2.png
simba/assets/icons/clip.png
simba/assets/icons/close.png
simba/assets/icons/cluster.png
simba/assets/icons/concat.png
simba/assets/icons/convert.png
simba/assets/icons/create.png
simba/assets/icons/crop.png
simba/assets/icons/dash_simba.css
simba/assets/icons/dimensionality_reduction.png
simba/assets/icons/documentation.png
simba/assets/icons/ethovision.png
simba/assets/icons/exit.png
simba/assets/icons/factory.png
simba/assets/icons/features.png
simba/assets/icons/fps.png
simba/assets/icons/frames.png
simba/assets/icons/gif.png
simba/assets/icons/grey.png
simba/assets/icons/label.png
simba/assets/icons/link.png
simba/assets/icons/load.png
simba/assets/icons/merge.png
simba/assets/icons/metrics.png
simba/assets/icons/outlier.png
simba/assets/icons/path.png
simba/assets/icons/pose.png
simba/assets/icons/print.png
simba/assets/icons/reorganize.png
simba/assets/icons/restart.png
simba/assets/icons/roi.png
simba/assets/icons/rotate.png
simba/assets/icons/sample.png
simba/assets/icons/settings.png
simba/assets/icons/stopwatch.png
simba/assets/icons/superimpose.png
simba/assets/icons/trash.png
simba/assets/icons/video.png
simba/assets/icons/visualize.png
simba/assets/icons/concat_icons/horizontal.png
simba/assets/icons/concat_icons/mixed_mosaic.png
simba/assets/icons/concat_icons/mosaic.png
simba/assets/icons/concat_icons/vertical.png
simba/assets/img/.DS_Store
simba/assets/img/about_me.png
simba/assets/img/bg.png
simba/assets/img/bg_2.png
simba/assets/img/splash.mp4
simba/assets/img/splash.pptx
simba/assets/lookups/.DS_Store
simba/assets/lookups/critical_values.xlsx
simba/assets/lookups/critical_values_05.pickle
simba/assets/lookups/critical_values_5.pickle
simba/assets/lookups/feature_extraction_headers.csv
simba/assets/lookups/features.csv
simba/assets/lookups/model_names.parquet
simba/assets/lookups/unsupervised_example_x.csv
simba/assets/shap/.DS_Store
simba/assets/shap/UbuntuMono-Regular.ttf
simba/assets/shap/animal_distances.jpg
simba/assets/shap/baseline_scale.jpg
simba/assets/shap/color_bar.jpg
simba/assets/shap/down_arrow.jpg
simba/assets/shap/intruder_movement.jpg
simba/assets/shap/intruder_shape.jpg
simba/assets/shap/resident_intruder_movement.jpg
simba/assets/shap/resident_intruder_shape.jpg
simba/assets/shap/resident_movement.jpg
simba/assets/shap/resident_shape.jpg
simba/assets/shap/side_scale.jpg
simba/assets/shap/side_scale_5.jpg
simba/assets/shap/ubuntu.regular.ttf
simba/assets/shap/feature_categories/.~lock.shap_feature_categories.csv#
simba/assets/shap/feature_categories/shap_feature_categories.csv
simba/assets/stl/grid_floor.stl
simba/assets/stl/operant_lever.stl
simba/assets/stl/operant_tray.stl
simba/assets/stl/operant_walls.stl
simba/assets/unsupervised/.DS_Store
simba/assets/unsupervised/features.csv
simba/assets/unsupervised/model_names.parquet
simba/blob_storage/.DS_Store
simba/bounding_box_tools/.DS_Store
simba/bounding_box_tools/__init__.py
simba/bounding_box_tools/agg_boundary_stats.py
simba/bounding_box_tools/boundary_menus.py
simba/bounding_box_tools/boundary_statistics.py
simba/bounding_box_tools/find_boundaries.py
simba/bounding_box_tools/visualize_boundaries.py
simba/cue_light_tools/.DS_Store
simba/cue_light_tools/__init__.py
simba/cue_light_tools/cue_light_analyzer.py
simba/cue_light_tools/cue_light_clf_statistics.py
simba/cue_light_tools/cue_light_menues.py
simba/cue_light_tools/cue_light_movement_statistics.py
simba/cue_light_tools/cue_light_tools.py
simba/cue_light_tools/cue_light_visualizer.py
simba/dash_app/SimBA_dash_app.py
simba/dash_app/dash_app.py
simba/dash_app/plotly_dash.py
simba/dash_app/run_dash_tkinter.py
simba/data_processors/.DS_Store
simba/data_processors/__init__.py
simba/data_processors/agg_clf_calculator.py
simba/data_processors/boolean_conditional_calculator.py
simba/data_processors/directing_other_animals_calculator.py
simba/data_processors/fsttc_calculator.py
simba/data_processors/gibbs_sampler.py
simba/data_processors/interpolate_pose.py
simba/data_processors/interpolation_smoothing.py
simba/data_processors/kleinberg_calculator.py
simba/data_processors/movement_calculator.py
simba/data_processors/mutual_exclusivity_corrector.py
simba/data_processors/pup_retrieval_calculator.py
simba/data_processors/pybursts_calculator.py
simba/data_processors/severity_bout_based_calculator.py
simba/data_processors/severity_calculator.py
simba/data_processors/severity_frame_based_calculator.py
simba/data_processors/timebins_clf_calculator.py
simba/data_processors/timebins_movement_calculator.py
simba/feature_extractors/.DS_Store
simba/feature_extractors/__init__.py
simba/feature_extractors/feature_extractor_14bp.py
simba/feature_extractors/feature_extractor_16bp.py
simba/feature_extractors/feature_extractor_4bp.py
simba/feature_extractors/feature_extractor_7bp.py
simba/feature_extractors/feature_extractor_8bp.py
simba/feature_extractors/feature_extractor_8bps_2_animals.py
simba/feature_extractors/feature_extractor_9bp.py
simba/feature_extractors/feature_extractor_circular.py
simba/feature_extractors/feature_extractor_user_defined.py
simba/feature_extractors/feature_subsets.py
simba/feature_extractors/perimeter_jit.py
simba/feature_extractors/.idea/.gitignore
simba/feature_extractors/.idea/.name
simba/feature_extractors/.idea/encodings.xml
simba/feature_extractors/.idea/features_scripts.iml
simba/feature_extractors/.idea/misc.xml
simba/feature_extractors/.idea/modules.xml
simba/feature_extractors/.idea/workspace.xml
simba/feature_extractors/.idea/inspectionProfiles/Project_Default.xml
simba/feature_extractors/.idea/libraries/R_User_Library.xml
simba/feature_extractors/misc/.DS_Store
simba/feature_extractors/misc/__init__.py
simba/feature_extractors/misc/add_probability_cnt_features.py
simba/feature_extractors/misc/append_audio_track.py
simba/feature_extractors/misc/catch_error_annotation_field.py
simba/feature_extractors/misc/catch_error_annotation_field.py.zip
simba/feature_extractors/misc/chow_test.py
simba/feature_extractors/misc/convex_hull_3_scratch_3.py
simba/feature_extractors/misc/convex_hull_scratch_1.py
simba/feature_extractors/misc/convex_hull_scratch_2.py
simba/feature_extractors/misc/cosine_similarity.py
simba/feature_extractors/misc/count_values_in_range.py
simba/feature_extractors/misc/doctests.py
simba/feature_extractors/misc/drift_check.py
simba/feature_extractors/misc/egocentrical_aligner.py
simba/feature_extractors/misc/fft_wt.py
simba/feature_extractors/misc/fftw.py
simba/feature_extractors/misc/fish_feature_extractor_2022.py
simba/feature_extractors/misc/fish_feature_extractor_2023_version_2.py
simba/feature_extractors/misc/fish_feature_extractor_2023_version_3.py
simba/feature_extractors/misc/fish_feature_extractor_2023_version_4.py
simba/feature_extractors/misc/fish_feature_extractor_2023_version_5.py
simba/feature_extractors/misc/graph_3d_plotter.py
simba/feature_extractors/misc/graph_creator.py
simba/feature_extractors/misc/hbos.py
simba/feature_extractors/misc/k_mean_video_sampler.py
simba/feature_extractors/misc/kendell_tau.py
simba/feature_extractors/misc/make_splash.py
simba/feature_extractors/misc/mutual_exclusive.py
simba/feature_extractors/misc/peaks.py
simba/feature_extractors/misc/poly.py
simba/feature_extractors/misc/read_files_mp_2.py
simba/feature_extractors/misc/read_in_mp.py
simba/feature_extractors/misc/shap_gpu.py
simba/feature_extractors/misc/shap_log_mp.py
simba/feature_extractors/misc/shap_log_mp_2.py
simba/feature_extractors/misc/sleap_dam_nest.py
simba/feature_extractors/misc/termite_rois.csv
simba/feature_extractors/misc/time_stamp_calculator.py
simba/feature_extractors/misc/video_color.py
simba/feature_extractors/misc/video_rotator.py
simba/feature_extractors/misc/video_rotator_mp.py
simba/labelling/.DS_Store
simba/labelling/__init__.py
simba/labelling/extract_labelled_frames.py
simba/labelling/labelling_advanced_interface.py
simba/labelling/labelling_interface.py
simba/labelling/labelling_interface_old.py
simba/labelling/play_annotation_video.py
simba/mixins/.DS_Store
simba/mixins/__init__.py
simba/mixins/circular_statistics.py
simba/mixins/config_reader.py
simba/mixins/feature_extraction_mixin.py
simba/mixins/feature_extraction_supplement_mixin.py
simba/mixins/plotting_mixin.py
simba/mixins/pop_up_mixin.py
simba/mixins/pose_importer_mixin.py
simba/mixins/statistics_mixin.py
simba/mixins/train_model_mixin.py
simba/mixins/unsupervised_mixin.py
simba/mixins/video_processing_mixin.py
simba/mixins/__pycache__/feature_extraction_mixin.FeatureExtractionMixin.angle3pt-84.py36m.1.nbc
simba/mixins/__pycache__/feature_extraction_mixin.FeatureExtractionMixin.angle3pt-84.py36m.2.nbc
simba/mixins/__pycache__/feature_extraction_mixin.FeatureExtractionMixin.angle3pt-84.py36m.nbi
simba/mixins/__pycache__/feature_extraction_mixin.FeatureExtractionMixin.cdist-333.py36m.1.nbc
simba/mixins/__pycache__/feature_extraction_mixin.FeatureExtractionMixin.cdist-333.py36m.nbi
simba/mixins/__pycache__/feature_extraction_mixin.FeatureExtractionMixin.cdist-334.py36m.1.nbc
simba/mixins/__pycache__/feature_extraction_mixin.FeatureExtractionMixin.cdist-334.py36m.nbi
simba/model/.DS_Store
simba/model/grid_search_rf.py
simba/model/inference_batch.py
simba/model/inference_validation.py
simba/model/train_rf.py
simba/outlier_tools/.DS_Store
simba/outlier_tools/__init__.py
simba/outlier_tools/outlier_corrector_location.py
simba/outlier_tools/outlier_corrector_location_advanced.py
simba/outlier_tools/outlier_corrector_movement.py
simba/outlier_tools/outlier_corrector_movement_advanced.py
simba/outlier_tools/skip_outlier_correction.py
simba/outlier_tools/.idea/encodings.xml
simba/outlier_tools/.idea/misc.xml
simba/outlier_tools/.idea/modules.xml
simba/outlier_tools/.idea/outlier_scripts.iml
simba/outlier_tools/.idea/workspace.xml
simba/outlier_tools/.idea/inspectionProfiles/Project_Default.xml
simba/outlier_tools/.idea/libraries/R_User_Library.xml
simba/plotting/.DS_Store
simba/plotting/Directing_animals_visualizer.py
simba/plotting/Directing_animals_visualizer_mp.py
simba/plotting/ROI_feature_visualizer.py
simba/plotting/ROI_feature_visualizer_mp.py
simba/plotting/ROI_plotter.py
simba/plotting/ROI_plotter_mp.py
simba/plotting/__init__.py
simba/plotting/circular_feature_overlay_plotter.py
simba/plotting/circular_plotting.py
simba/plotting/clf_validator.py
simba/plotting/data_plotter.py
simba/plotting/directing_animals_visualizer.py
simba/plotting/directing_animals_visualizer_mp.py
simba/plotting/distance_plotter.py
simba/plotting/distance_plotter_mp.py
simba/plotting/ez_lineplot.py
simba/plotting/frame_mergerer_ffmpeg.py
simba/plotting/gantt_creator.py
simba/plotting/gantt_creator_mp.py
simba/plotting/heat_mapper_clf.py
simba/plotting/heat_mapper_clf_mp.py
simba/plotting/heat_mapper_location.py
simba/plotting/heat_mapper_location_mp.py
simba/plotting/interactive_probability_grapher.py
simba/plotting/path_plotter.py
simba/plotting/path_plotter_mp.py
simba/plotting/plot_clf_results.py
simba/plotting/plot_clf_results_mp.py
simba/plotting/pose_plotter_mp.py
simba/plotting/probability_plot_creator.py
simba/plotting/probability_plot_creator_mp.py
simba/plotting/shap_agg_stats_visualizer.py
simba/plotting/single_run_model_validation_video.py
simba/plotting/single_run_model_validation_video_mp.py
simba/plotting/tools/tkinter_tools.py
simba/pose_configurations/.DS_Store
simba/pose_configurations/bp_names/.DS_Store
simba/pose_configurations/bp_names/bp_names.csv
simba/pose_configurations/configuration_names/.DS_Store
simba/pose_configurations/configuration_names/pose_config_names.csv
simba/pose_configurations/no_animals/.DS_Store
simba/pose_configurations/no_animals/no_animals.csv
simba/pose_configurations/schematics/1.png
simba/pose_configurations/schematics/10.png
simba/pose_configurations/schematics/11.png
simba/pose_configurations/schematics/12.png
simba/pose_configurations/schematics/2.png
simba/pose_configurations/schematics/3.png
simba/pose_configurations/schematics/4.png
simba/pose_configurations/schematics/5.png
simba/pose_configurations/schematics/6.png
simba/pose_configurations/schematics/7.png
simba/pose_configurations/schematics/8.png
simba/pose_configurations/schematics/9.png
simba/pose_configurations_archive/pose_configurations_archive_1/.DS_Store
simba/pose_configurations_archive/pose_configurations_archive_1/bp_names/.DS_Store
simba/pose_configurations_archive/pose_configurations_archive_1/bp_names/bp_names.csv
simba/pose_configurations_archive/pose_configurations_archive_1/configuration_names/.DS_Store
simba/pose_configurations_archive/pose_configurations_archive_1/configuration_names/pose_config_names.csv
simba/pose_configurations_archive/pose_configurations_archive_1/no_animals/.DS_Store
simba/pose_configurations_archive/pose_configurations_archive_1/no_animals/no_animals.csv
simba/pose_configurations_archive/pose_configurations_archive_1/schematics/.DS_Store
simba/pose_configurations_archive/pose_configurations_archive_1/schematics/1.png
simba/pose_configurations_archive/pose_configurations_archive_1/schematics/10.png
simba/pose_configurations_archive/pose_configurations_archive_1/schematics/11.png
simba/pose_configurations_archive/pose_configurations_archive_1/schematics/12.png
simba/pose_configurations_archive/pose_configurations_archive_1/schematics/13.png
simba/pose_configurations_archive/pose_configurations_archive_1/schematics/2.png
simba/pose_configurations_archive/pose_configurations_archive_1/schematics/3.png
simba/pose_configurations_archive/pose_configurations_archive_1/schematics/4.png
simba/pose_configurations_archive/pose_configurations_archive_1/schematics/5.png
simba/pose_configurations_archive/pose_configurations_archive_1/schematics/6.png
simba/pose_configurations_archive/pose_configurations_archive_1/schematics/7.png
simba/pose_configurations_archive/pose_configurations_archive_1/schematics/8.png
simba/pose_configurations_archive/pose_configurations_archive_1/schematics/9.png
simba/pose_importers/.DS_Store
simba/pose_importers/__init__.py
simba/pose_importers/dlc_importer_csv.py
simba/pose_importers/import_mars.py
simba/pose_importers/madlc_importer.py
simba/pose_importers/read_DANNCE_mat.py
simba/pose_importers/sleap_csv_importer.py
simba/pose_importers/sleap_h5_importer.py
simba/pose_importers/sleap_slp_importer.py
simba/pose_importers/trk_importer.py
simba/pose_importers/misc/.DS_Store
simba/pose_importers/misc/apt_trk_importer.py
simba/pose_processors/.DS_Store
simba/pose_processors/__init__.py
simba/pose_processors/pose_reset.py
simba/pose_processors/remove_keypoints.py
simba/pose_processors/reorganize_keypoint.py
simba/pose_processors/reverse_pose.py
simba/roi_tools/.DS_Store
simba/roi_tools/ROI_analyzer.py
simba/roi_tools/ROI_clf_calculator.py
simba/roi_tools/ROI_define.py
simba/roi_tools/ROI_directing_analyzer.py
simba/roi_tools/ROI_feature_analyzer.py
simba/roi_tools/ROI_image.py
simba/roi_tools/ROI_menus.py
simba/roi_tools/ROI_move_shape.py
simba/roi_tools/ROI_movement_analyzer.py
simba/roi_tools/ROI_multiply.py
simba/roi_tools/ROI_reset.py
simba/roi_tools/ROI_size_calculations.py
simba/roi_tools/ROI_size_standardizer.py
simba/roi_tools/ROI_time_bin_calculator.py
simba/roi_tools/ROI_zoom.py
simba/roi_tools/__init__.py
simba/st/__init__.py
simba/st/aggregate_statistics.py
simba/st/app.py
simba/st/enums.py
simba/st/select_groups_pg.py
simba/st/welcome_page.py
simba/third_party_label_appenders/.DS_Store
simba/third_party_label_appenders/BENTO_appender.py
simba/third_party_label_appenders/BORIS_appender.py
simba/third_party_label_appenders/__init__.py
simba/third_party_label_appenders/boris_source_cleaner.py
simba/third_party_label_appenders/deepethogram_importer.py
simba/third_party_label_appenders/ethovision_import.py
simba/third_party_label_appenders/observer_importer.py
simba/third_party_label_appenders/solomon_importer.py
simba/third_party_label_appenders/third_party_appender.py
simba/third_party_label_appenders/tools.py
simba/three_dimensions/.DS_Store
simba/three_dimensions/feature_extractors/generic_feature_extractor.py
simba/three_dimensions/mixins/config_reader.py
simba/three_dimensions/mixins/feature_extraction_mixin.py
simba/three_dimensions/mixins/plotting_mixin.py
simba/three_dimensions/mixins/__pycache__/feature_extraction_mixin.FeatureExtractionMixin.framewise_euclidean_distance-10.py36m.1.nbc
simba/three_dimensions/mixins/__pycache__/feature_extraction_mixin.FeatureExtractionMixin.framewise_euclidean_distance-10.py36m.nbi
simba/three_dimensions/mixins/__pycache__/feature_extraction_mixin.FeatureExtractionMixin.framewise_euclidean_distance-6.py36m.1.nbc
simba/three_dimensions/mixins/__pycache__/feature_extraction_mixin.FeatureExtractionMixin.framewise_euclidean_distance-6.py36m.nbi
simba/three_dimensions/outlier_tools/outlier_corrector_movement.py
simba/three_dimensions/plotting/plot_pose_in_dir.py
simba/three_dimensions/pose_importers/anipose_csv_import.py
simba/three_dimensions/ui/define_px_to_mm_ui.py
simba/ui/.DS_Store
simba/ui/__init__.py
simba/ui/create_project_ui.py
simba/ui/machine_model_settings_ui.py
simba/ui/tkinter_functions.py
simba/ui/user_defined_pose_creator.py
simba/ui/video_info_ui.py
simba/ui/pop_ups/.DS_Store
simba/ui/pop_ups/__init__.py
simba/ui/pop_ups/about_simba_pop_up.py
simba/ui/pop_ups/animal_directing_other_animals_pop_up.py
simba/ui/pop_ups/append_roi_features_animals_pop_up.py
simba/ui/pop_ups/append_roi_features_bodypart_pop_up.py
simba/ui/pop_ups/archive_files_pop_up.py
simba/ui/pop_ups/batch_preprocess_pop_up.py
simba/ui/pop_ups/boolean_conditional_slicer_pup_up.py
simba/ui/pop_ups/clf_add_remove_print_pop_up.py
simba/ui/pop_ups/clf_by_roi_pop_up.py
simba/ui/pop_ups/clf_by_timebins_pop_up.py
simba/ui/pop_ups/clf_descriptive_statistics_pop_up.py
simba/ui/pop_ups/clf_plot_pop_up.py
simba/ui/pop_ups/clf_probability_plot_pop_up.py
simba/ui/pop_ups/clf_validation_plot_pop_up.py
simba/ui/pop_ups/create_user_defined_pose_configuration_pop_up.py
simba/ui/pop_ups/csv_2_parquet_pop_up.py
simba/ui/pop_ups/data_plot_pop_up.py
simba/ui/pop_ups/directing_other_animals_plot_pop_up.py
simba/ui/pop_ups/distance_plot_pop_up.py
simba/ui/pop_ups/fsttc_pop_up.py
simba/ui/pop_ups/gantt_pop_up.py
simba/ui/pop_ups/heatmap_clf_pop_up.py
simba/ui/pop_ups/heatmap_location_pop_up.py
simba/ui/pop_ups/kleinberg_pop_up.py
simba/ui/pop_ups/make_path_plot_pop_up.py
simba/ui/pop_ups/movement_analysis_pop_up.py
simba/ui/pop_ups/movement_analysis_time_bins_pop_up.py
simba/ui/pop_ups/mutual_exclusivity_pop_up.py
simba/ui/pop_ups/outlier_settings_pop_up.py
simba/ui/pop_ups/path_plot_pop_up.py
simba/ui/pop_ups/pose_bp_drop_pop_up.py
simba/ui/pop_ups/pose_reorganizer_pop_up.py
simba/ui/pop_ups/pup_retrieval_pop_up.py
simba/ui/pop_ups/quick_path_plot_pop_up.py
simba/ui/pop_ups/remove_roi_features_pop_up.py
simba/ui/pop_ups/roi_analysis_pop_up.py
simba/ui/pop_ups/roi_analysis_time_bins_pop_up.py
simba/ui/pop_ups/roi_features_plot_pop_up.py
simba/ui/pop_ups/roi_size_standardizer_popup.py
simba/ui/pop_ups/roi_tracking_plot_pop_up.py
simba/ui/pop_ups/set_machine_model_parameters_pop_up.py
simba/ui/pop_ups/severity_analysis_pop_up.py
simba/ui/pop_ups/smoothing_interpolation_pop_up.py
simba/ui/pop_ups/subset_feature_extractor_pop_up.py
simba/ui/pop_ups/third_party_annotator_appender_pop_up.py
simba/ui/pop_ups/validation_plot_pop_up.py
simba/ui/pop_ups/video_processing_pop_up.py
simba/ui/pop_ups/visualize_pose_in_dir_pop_up.py
simba/unsupervised/.DS_Store
simba/unsupervised/__init__.py
simba/unsupervised/bout_aggregator.py
simba/unsupervised/cluster_statistics.py
simba/unsupervised/cluster_visualizer.py
simba/unsupervised/data_extractor.py
simba/unsupervised/data_map.yaml
simba/unsupervised/dataset_creator.py
simba/unsupervised/dbcv_calculator.py
simba/unsupervised/enums.py
simba/unsupervised/grid_search_visualizers.py
simba/unsupervised/hdbscan_clusterer.py
simba/unsupervised/pop_up_classes.py
simba/unsupervised/tsne.py
simba/unsupervised/ui.py
simba/unsupervised/umap_embedder.py
simba/utils/.DS_Store
simba/utils/__init__.py
simba/utils/checks.py
simba/utils/config_creator.py
simba/utils/data.py
simba/utils/enums.py
simba/utils/errors.py
simba/utils/lookups.py
simba/utils/printing.py
simba/utils/read_write.py
simba/utils/warnings.py
simba/utils/cli/.DS_Store
simba/utils/cli/__init__.py
simba/utils/cli/cli_tools.py
simba/video_processors/.DS_Store
simba/video_processors/__init__.py
simba/video_processors/batch_process_create_ffmpeg_commands.py
simba/video_processors/batch_process_menus.py
simba/video_processors/calculate_px_dist.py
simba/video_processors/extract_frames.py
simba/video_processors/extract_seqframes.py
simba/video_processors/multi_cropper.py
simba/video_processors/px_to_mm.py
simba/video_processors/video_processing.py
tests/__init__.py
tests/test_config_reader_mixin.py
tests/test_data_processors.py
tests/test_distance_plotter.py
tests/test_feature_extraction_mixin.py
tests/test_featurizers.py
tests/test_interpolation_smoothing.py
tests/test_outlier_correctors.py
tests/test_pose_importers.py
tests/test_pose_processors.py
tests/test_roi_tools.py
tests/test_thirdparty_appenders.py
tests/test_train_model_mixin.py
tests/test_utils_data.py
tests/test_validation_clips.py
tests/test_video_processors.py
tests/test_visualize_directing_animals.py
tests/data/__init__.py
tests/data/test_projects/__init__.py
tests/data/test_projects/mouse_open_field/__init__.py
tests/data/test_projects/two_c57/__init__.py
tests/data/test_projects/two_c57/expected_animal_bp_dict/__init__.py
tests/data/test_projects/two_c57/models/__init__.py
tests/data/test_projects/two_c57/video_processing/__init__.py
tests/data/test_projects/two_c57/video_processing/test_imgs/__init__.py
tests/data/test_projects/zebrafish/__init__.py
tests/data/test_projects/zebrafish/feature_file/__init__.py
tests/data/test_projects/zebrafish/feature_file/fish_feature_extraction_092221.py
tests/data/test_projects/zebrafish/models/__init__.py
tests/data/test_projects/zebrafish/models/generated_models/__init__.py
tests/data/test_projects/zebrafish/models/validations/__init__.py
tests/data/test_projects/zebrafish/project_folder/__init__.py
tests/data/test_projects/zebrafish/project_folder/logs/__init__.py
tests/data/test_projects/zebrafish/project_folder/logs/measures/__init__.py
tests/data/test_projects/zebrafish/project_folder/videos/__init__.py