Metadata-Version: 2.1
Name: sctriangulate
Version: 0.9.1
Summary: A Python package to mix-and-match conflicting clustering results in single cell analysis, and generate reconciled clustering solutions.
Home-page: https://github.com/frankligy/scTriangulate
Author: Guangyuan(Frank) Li
Author-email: li2g2@mail.uc.edu
Maintainer: Guangyuan(Frank) Li
Maintainer-email: li2g2@mail.uc.edu
License: UNKNOWN
Project-URL: Ducumentation, https://sctriangulate.readthedocs.io
Description: # scTriangulate
        
        scTriangulate is a Python package to mix-and-match conflicting clustering results in single cell analysis, and generate reconciled 
        clustering solutions.
        
        ## Tutorials
        
        Check our full [documentation.](https://sctriangulate.readthedocs.io/en/latest/)
        
        ## Overview
        
        ![schema](./image/schema.png)
        
        It can potentially be used in an array of settings:
        
        1. Running same unsupervised clustering (i.e. Leiden) algorithm using different resolutions.
        
        2. Running unsupervised clustering using different algorithms.
        
        3. Running reference mapping tools using different reference atlases.
        
        4. Clustering labels from matched multi-modalities (RNA, ADT, ATAC, etc)
        
        ![schuma_chop](./image/schema_chop.png)
        
        
        ## Citation
        
        scTriangulate will be presented in [2021 CZI Single-Cell Biology Annual Meeting](https://docs.google.com/document/d/142W5qCsXpv9CyyvQhmu_Re-Wf6mN7zZrAzarMMI6Se4/edit). 
        
        A preprint will come out soon.
        
        
        ## Contact
        
        Guangyuan(Frank) Li
        
        li2g2@mail.uc.edu
        
        PhD student, Biomedical Informatics
        
        Cincinnati Children’s Hospital Medical Center(CCHMC)
        
        University of Cincinnati, College of Medicine
        
Platform: UNKNOWN
Classifier: Development Status :: 3 - Alpha
Classifier: Programming Language :: Python :: 3
Classifier: License :: OSI Approved :: BSD License
Classifier: Operating System :: OS Independent
Requires-Python: >=3.7
Description-Content-Type: text/markdown
