LICENSE.txt
MANIFEST.in
README.md
setup.cfg
setup.py
streamd/__init__.py
streamd/md_analysis.py
streamd/run_gbsa.py
streamd/run_md.py
streamd.egg-info/PKG-INFO
streamd.egg-info/SOURCES.txt
streamd.egg-info/dependency_links.txt
streamd.egg-info/entry_points.txt
streamd.egg-info/requires.txt
streamd.egg-info/top_level.txt
streamd/example/instructions.txt
streamd/example/ligand.mol
streamd/example/protein_HIS.pdb
streamd/mcpbpy_md/__init__.py
streamd/mcpbpy_md/mcbpy_md.py
streamd/preparation/__init__.py
streamd/preparation/complex_preparation.py
streamd/preparation/ligand_preparation.py
streamd/preparation/mcpbpy_preparation.py
streamd/preparation/md_files_preparation.py
streamd/prolif/__init__.py
streamd/prolif/prolif2png.py
streamd/prolif/prolif_frame_map.py
streamd/prolif/run_prolif.py
streamd/scripts/__init__.py
streamd/scripts/getcharge.py
streamd/scripts/mol2_fix_coordsbonds.py
streamd/scripts/pdb2mol.py
streamd/scripts/pmed_amb2gmx.py
streamd/scripts/prepare_Gaussian_input.py
streamd/scripts/tleap.in
streamd/scripts/xvg2png.py
streamd/scripts/com/1.com
streamd/scripts/com/2.com
streamd/scripts/com/3.com
streamd/scripts/gbsa/mmpbsa.in
streamd/scripts/mcpbpy_scripts/protein.in
streamd/scripts/mdp/ions.mdp
streamd/scripts/mdp/md.mdp
streamd/scripts/mdp/minim.mdp
streamd/scripts/mdp/npt.mdp
streamd/scripts/mdp/nvt.mdp
streamd/scripts/script_sh/continue_md.sh
streamd/scripts/script_sh/equlibration.sh
streamd/scripts/script_sh/ligand_mol2prep.sh
streamd/scripts/script_sh/ligand_mol2prep_by_gaussian.sh
streamd/scripts/script_sh/ligand_prep.sh
streamd/scripts/script_sh/md.sh
streamd/scripts/script_sh/md_analysis.sh
streamd/scripts/script_sh/md_ligand_analysis.sh
streamd/scripts/script_sh/solv_ions.sh
streamd/utils/__init__.py
streamd/utils/dask_init.py
streamd/utils/utils.py