Metadata-Version: 2.1
Name: objmpp-classification
Version: 0.1.1
Summary: Package to enhance segmentation and perform classification from obj.MPP output
Home-page: https://github.com/JEmonet67/objmpp-classification
Author: Jérôme Emonet
Author-email: jerome.emonet.67@gmail.com
License: MIT License
Platform: UNKNOWN
Classifier: Programming Language :: Python :: 3
Classifier: License :: OSI Approved :: MIT License
Requires-Python: >=3.6.0
Description-Content-Type: text/markdown
Requires-Dist: click
Requires-Dist: numpy
Requires-Dist: pathlib
Requires-Dist: matplotlib
Requires-Dist: pandas
Requires-Dist: imageio
Requires-Dist: scikit-image
Requires-Dist: opencv-python
Requires-Dist: Pillow
Requires-Dist: scipy
Requires-Dist: progress

[![Version](https://img.shields.io/pypi/v/objmpp-classification)](https://pypi.org/project/objmpp-classification) [![Upload Python Package](https://github.com/JEmonet67/objmpp-classification/workflows/Upload%20Python%20Package/badge.svg)](https://github.com/JEmonet67/objmpp-classification/actions?query=workflow%3A%22Upload+Python+Package%22)

## Install package

```bash
pip install objmpp-classification
```

> PyPI link : https://pypi.org/project/objmpp-classification

## Run package

### Run in Python script 

```python
from objmpp_classification import organoid_classification

organoid_classification.organoid_classification(path_data, path_images)
```

### Run with command line

```bash
objmpp-classification organoid /home/path_data /home/path_images
```

Show options:

```bash
objmpp-classification --help
```

## Install for development

If you want to develop on the package, this will update the package locally automatically when the files changes:

```bash
pip install -e .
```



