Metadata-Version: 2.1
Name: lcep-package
Version: 2.0.0
Summary: Python package for lcep.
Home-page: https://github.com/mlf-core/lcep-package
Author: Lukas Heumos
Author-email: lukas.heumos@posteo.net
License: MIT
Keywords: lcep-package
Platform: UNKNOWN
Classifier: Development Status :: 2 - Pre-Alpha
Classifier: Intended Audience :: Developers
Classifier: License :: OSI Approved :: MIT License
Classifier: Natural Language :: English
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3.7
Classifier: Programming Language :: Python :: 3.8
Requires-Python: >=3.7
Requires-Dist: rich (==9.1.0)
Requires-Dist: click (==7.1.2)
Requires-Dist: xgboost (==1.2.1)
Requires-Dist: numpy (==1.19.1)

============
lcep-package
============

.. image:: https://github.com/mlf-core/lcep-package/workflows/Build%20lcep-package%20Package/badge.svg
        :target: https://github.com/mlf-core/lcep-package/workflows/Build%20lcep-package%20Package/badge.svg
        :alt: Github Workflow Build lcep-package Status

.. image:: https://github.com/mlf-core/lcep-package/workflows/Run%20lcep-package%20Tox%20Test%20Suite/badge.svg
        :target: https://github.com/mlf-core/lcep-package/workflows/Run%20lcep-package%20Tox%20Test%20Suite/badge.svg
        :alt: Github Workflow Tests Status

.. image:: https://img.shields.io/pypi/v/lcep-package.svg
        :target: https://pypi.python.org/pypi/lcep-package
        :alt: PyPI Status


.. image:: https://readthedocs.org/projects/lcep-package/badge/?version=latest
        :target: https://lcep-package.readthedocs.io/en/latest/?badge=latest
        :alt: Documentation Status

.. image:: https://flat.badgen.net/dependabot/thepracticaldev/dev.to?icon=dependabot
        :target: https://flat.badgen.net/dependabot/thepracticaldev/dev.to?icon=dependabot
        :alt: Dependabot Enabled


Python package for lcep.


* Free software: MIT
* Documentation: https://lcep-package.readthedocs.io.


Features
--------

* TODO

Credits
-------

This package was created with cookietemple_ using Cookiecutter_.

.. _cookietemple: https://cookietemple.com
.. _Cookiecutter: https://github.com/audreyr/cookiecutter


==========
Changelog
==========

This project adheres to `Semantic Versioning <https://semver.org/>`_.

2.0.0 (2021-04-08)
------------------

**Added**

* Added model (v2) trained on recount2 TCGA/GTEx liver(cancer) data obtained from mlf-core/lcep
* Replaced test data

**Fixed**

**Dependencies**

**Deprecated**


1.2.0 (2020-08-28)
------------------

**Added**

* Added flag --cuda and --no-cuda to enable and disable GPU prediction

**Fixed**

**Dependencies**

**Deprecated**


1.1.0 (2020-08-28)
------------------

**Added**

**Fixed**

* help command message

**Dependencies**

**Deprecated**


1.0.0 (2020-08-28)
------------------

**Added**

* Parsing of an appropriate data input file
* Loading an already trained model and performing predictions
* Writing the predictions to an output file

**Fixed**

**Dependencies**

**Deprecated**


0.1.0 (2020-08-28)
------------------

**Added**

* Created the project using cookietemple

**Fixed**

**Dependencies**

**Deprecated**


