Metadata-Version: 2.1
Name: pyjamas-rfglab
Version: 2024.4.3
Summary: PyJAMAS is Just A More Awesome SIESTA
Home-page: https://bitbucket.org/rfg_lab/pyjamas
Author: Rodrigo Fernandez-Gonzalez
Author-email: rodrigo.fernandez.gonzalez@utoronto.ca
Classifier: Programming Language :: Python :: 3.10
Classifier: License :: OSI Approved :: GNU General Public License v3 (GPLv3)
Classifier: Operating System :: OS Independent
Requires-Python: >=3.8
Description-Content-Type: text/markdown
Requires-Dist: ipywidgets (>=8.0.4)
Requires-Dist: joblib (>=1.2.0)
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Requires-Dist: matplotlib (>=3.7.1)
Requires-Dist: nbformat (>=5.7.0)
Requires-Dist: networkx (>=2.8.4)
Requires-Dist: numba (==0.57.1)
Requires-Dist: numpy (==1.23.5)
Requires-Dist: opencv-python-headless (==4.6.0.66)
Requires-Dist: pandas (>=1.5.3)
Requires-Dist: pyqt6 (==6.4.2)
Requires-Dist: scikit-image (>=0.21.0)
Requires-Dist: scikit-learn (>=1.2.2)
Requires-Dist: scipy (>=1.10.1)
Requires-Dist: seaborn (>=0.13.0)
Requires-Dist: setuptools (>=67.8.0)
Requires-Dist: shapely (>=2.0.1)
Requires-Dist: tensorflow (>=2.11.0)

![Logo](./docs/images/paperfigure_v6.png)
[![GPLv3 License](https://img.shields.io/badge/License-GPL%20v3-yellow.svg)](https://opensource.org/licenses/GPL-3.0)

# PyJAMAS

[**Py**JAMAS](https://bitbucket.org/rfg_lab/pyjamas/src/master/) is **J**ust **A** **M**ore **A**wesome **S**iesta.

## Documentation and installation instructions

You can find the official [PyJAMAS](https://bitbucket.org/rfg_lab/pyjamas/src/master/) documentation, with detailed
installation instructions, [**here**](https://pyjamas.readthedocs.io).

## Citing PyJAMAS

If you use [PyJAMAS](https://bitbucket.org/rfg_lab/pyjamas/src/master/), please cite:

Fernandez-Gonzalez R, Balaghi N, Wang K, Hawkins R, Rothenberg K, McFaul C, Schimmer C, Ly M, do Carmo A, Scepanovic G,
Erdemci-Tandogan G, Castle V. **PyJAMAS: open-source, multimodal segmentation and analysis of microscopy images**. *
Bioinformatics*. 2021 Aug 13:btab589. doi: 10.1093/bioinformatics/btab589.

## Sponsors

We are grateful for the generous support from the following agencies and institutions, which contribute to the
development and maintenance of [PyJAMAS](https://bitbucket.org/rfg_lab/pyjamas/src/master/):

![Sponsors](./docs/images/sponsors.png)
