LICENSE.txt
MANIFEST.in
README.md
setup.cfg
setup.py
./nngt/__init__.py
./nngt/nngt.conf.default
./nngt/analysis/__init__.py
./nngt/analysis/activity_analysis.py
./nngt/analysis/bayesian_blocks.py
./nngt/analysis/clustering.py
./nngt/analysis/graph_analysis.py
./nngt/analysis/gt_functions.py
./nngt/analysis/ig_functions.py
./nngt/analysis/nngt_functions.py
./nngt/analysis/nx_functions.py
./nngt/core/__init__.py
./nngt/core/connections.py
./nngt/core/graph.py
./nngt/core/graph_interface.py
./nngt/core/group_structure.py
./nngt/core/gt_graph.py
./nngt/core/ig_graph.py
./nngt/core/networks.py
./nngt/core/neural_pop_group.py
./nngt/core/nngt_graph.py
./nngt/core/nx_graph.py
./nngt/core/spatial_graph.py
./nngt/database/__init__.py
./nngt/database/csv_utils.py
./nngt/database/db_generation.py
./nngt/database/db_main.py
./nngt/database/pickle_field.py
./nngt/generation/__init__.py
./nngt/generation/cconnect.cpp
./nngt/generation/cconnect.pxd
./nngt/generation/cconnect.pyx
./nngt/generation/cconnect.pyxbld
./nngt/generation/connect_algorithms.py
./nngt/generation/connectors.py
./nngt/generation/func_connect.cpp
./nngt/generation/func_connect.h
./nngt/generation/graph_connectivity.py
./nngt/generation/mpi_connect.py
./nngt/generation/rewiring.py
./nngt/geometry/README.md
./nngt/geometry/__init__.py
./nngt/geometry/backup_shape.py
./nngt/geometry/dxftools.py
./nngt/geometry/geom_utils.py
./nngt/geometry/plot.py
./nngt/geometry/pync_log.py
./nngt/geometry/requirements.txt
./nngt/geometry/setup.py
./nngt/geometry/shape.py
./nngt/geometry/shape_io.py
./nngt/geometry/svgtools.py
./nngt/geometry/tools.py
./nngt/geometry/triangulate.py
./nngt/geometry/units.py
./nngt/geometry/dxf_import/__init__.py
./nngt/geometry/dxf_import/homcoord.py
./nngt/geometry/dxf_import/read_dxf.py
./nngt/geospatial/__init__.py
./nngt/geospatial/countries.py
./nngt/geospatial/plot.py
./nngt/io/__init__.py
./nngt/io/graph_loading.py
./nngt/io/graph_saving.py
./nngt/io/io_helpers.py
./nngt/io/loading_helpers.py
./nngt/io/saving_helpers.py
./nngt/lib/__init__.py
./nngt/lib/_frozendict.py
./nngt/lib/connect_tools.py
./nngt/lib/constants.py
./nngt/lib/converters.py
./nngt/lib/db_tools.py
./nngt/lib/decorator.py
./nngt/lib/errors.py
./nngt/lib/graph_backends.py
./nngt/lib/graph_helpers.py
./nngt/lib/logger.py
./nngt/lib/nngt_config.py
./nngt/lib/rng_tools.py
./nngt/lib/sorting.py
./nngt/lib/test_functions.py
./nngt/plot/__init__.py
./nngt/plot/animations.py
./nngt/plot/custom_plt.py
./nngt/plot/hive_helpers.py
./nngt/plot/plt_networks.py
./nngt/plot/plt_properties.py
./nngt/plot/chord_diag/README.md
./nngt/plot/chord_diag/__init__.py
./nngt/plot/chord_diag/_info.py
./nngt/plot/chord_diag/chord_diagram.py
./nngt/plot/chord_diag/example.py
./nngt/plot/chord_diag/gradient.py
./nngt/plot/chord_diag/requirements.txt
./nngt/plot/chord_diag/setup.py
./nngt/plot/chord_diag/utilities.py
./nngt/simulation/__init__.py
./nngt/simulation/nest_activity.py
./nngt/simulation/nest_graph.py
./nngt/simulation/nest_plot.py
./nngt/simulation/nest_utils.py
./testing/__init__.py
./testing/base_test.py
./testing/library_compatibility.py
./testing/test_analysis.py
./testing/test_attributes.py
./testing/test_basics.py
./testing/test_connect_group_type.py
./testing/test_examples.py
./testing/test_gallery.py
./testing/test_generation.py
./testing/test_generation2.py
./testing/test_graphclasses.py
./testing/test_group_pop.py
./testing/test_io.py
./testing/test_mpi.py
./testing/test_nest.py
./testing/test_plots.py
./testing/test_random.py
./testing/test_rewire.py
./testing/test_weights.py
./testing/tools_testing.py
doc/autosum.py
doc/conf.py
doc/environment.yml
doc/index.rst
doc/pip-require.txt
doc/_static/custom.css
doc/_static/nngt_logo.png
doc/_static/nngt_logo.svg
doc/_templates/base.html
doc/developer/contributing.rst
doc/developer/detailed-structure.rst
doc/developer/graph-attributes.rst
doc/developer/library_shipping.rst
doc/developer/optimization.rst
doc/developer/precision.rst
doc/examples/attributes.py
doc/examples/basic_nest_network.py
doc/examples/groups_and_metagroups.py
doc/examples/introduction_to_groups.py
doc/examples/introductory_tutorial.py
doc/examples/multi_groups_network.py
doc/examples/nest_network.py
doc/examples/nest_receptor_ports.py
doc/examples/nngt_tutorial.ipynb
doc/examples/random_balanced.py
doc/examples/simple_graphs.py
doc/examples/spatial_graphs.py
doc/examples/graph_properties/README.rst
doc/examples/graph_properties/plot_attributes.py
doc/examples/graph_properties/plot_betweenness.py
doc/examples/graph_properties/plot_degrees.py
doc/examples/graph_structure/README.rst
doc/examples/graph_structure/plot_chord_diagram.py
doc/examples/graph_structure/plot_hive_panel.py
doc/examples/graph_structure/plot_layouts.py
doc/examples/graph_structure/plot_map.py
doc/extensions/extlinks_fancy.py
doc/extensions/linksourcecode.py
doc/future/interoperability.rst
doc/gallery/gallery.rst
doc/images/nngt_ico.png
doc/images/nngt_ico.svg
doc/images/nngt_logo.pdf
doc/images/nngt_logo.svg
doc/modules/analysis.rst
doc/modules/analysis.rst.in
doc/modules/database.rst
doc/modules/generation.rst
doc/modules/generation.rst.in
doc/modules/geometry.rst
doc/modules/geometry.rst.in
doc/modules/geospatial.rst
doc/modules/lib.rst
doc/modules/lib.rst.in
doc/modules/nngt.rst
doc/modules/nngt.rst.in
doc/modules/plot.rst
doc/modules/plot.rst.in
doc/modules/simulation.rst
doc/modules/simulation.rst.in
doc/modules/examples/areas.svg
doc/modules/examples/backup_shape.py
doc/modules/examples/culture.dxf
doc/modules/examples/culture_from_filled_polygons.svg
doc/modules/examples/culture_with_holes.svg
doc/modules/examples/gen_obstacles.py
doc/modules/examples/load_culture.py
doc/modules/examples/load_shapes.py
doc/modules/nngt/graph-classes.rst
doc/modules/nngt/graph-classes.rst.in
doc/modules/nngt/main-functions.rst
doc/modules/nngt/main-functions.rst.in
doc/modules/nngt/side-classes.rst
doc/modules/nngt/side-classes.rst.in
doc/user/activity-analysis.rst
doc/user/component-properties.rst
doc/user/graph-analysis.rst
doc/user/graph-generation.rst
doc/user/install.rst
doc/user/intro.rst
doc/user/nest-interaction.rst
doc/user/neural-groups.rst
doc/user/parallelism.rst
doc/user/tutorial.rst
nngt/nngt.conf.default
nngt.egg-info/PKG-INFO
nngt.egg-info/SOURCES.txt
nngt.egg-info/dependency_links.txt
nngt.egg-info/requires.txt
nngt.egg-info/top_level.txt