Metadata-Version: 2.1
Name: napari-spatialdata
Version: 0.1.0
Summary: Interactive visualization of spatial omics data with napari
Home-page: https://github.com/scverse/napari-spatialdata.git
Author: giovanni palla
Author-email: giov.pll@gmail.com
License: BSD-3-Clause
Project-URL: Bug Tracker, https://github.com/scverse/napari-spatialdata/issues
Project-URL: Documentation, https://github.com/scverse/napari-spatialdata#README.md
Project-URL: Source Code, https://github.com/scverse/napari-spatialdata
Project-URL: User Support, https://github.com/scverse/napari-spatialdata/issues
Classifier: Development Status :: 2 - Pre-Alpha
Classifier: Intended Audience :: Developers
Classifier: Framework :: napari
Classifier: Topic :: Software Development :: Testing
Classifier: Programming Language :: Python
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3.8
Classifier: Programming Language :: Python :: 3.9
Classifier: Programming Language :: Python :: 3.10
Classifier: Operating System :: OS Independent
Classifier: License :: OSI Approved :: BSD License
Requires-Python: >=3.8
Description-Content-Type: text/markdown
License-File: LICENSE
Requires-Dist: numpy
Requires-Dist: magicgui
Requires-Dist: qtpy
Requires-Dist: numba
Requires-Dist: anndata
Requires-Dist: scikit-image
Requires-Dist: squidpy
Requires-Dist: napari[all]
Requires-Dist: loguru
Provides-Extra: testing
Requires-Dist: tox ; extra == 'testing'
Requires-Dist: pytest ; extra == 'testing'
Requires-Dist: pytest-cov ; extra == 'testing'
Requires-Dist: pytest-qt ; extra == 'testing'
Requires-Dist: napari ; extra == 'testing'
Requires-Dist: pre-commit (>=2.9.0) ; extra == 'testing'
Requires-Dist: towncrier (>=21.3.0) ; extra == 'testing'

# napari-spatialdata

[![License](https://img.shields.io/pypi/l/napari-spatialdata.svg?color=green)](https://github.com/scverse/napari-spatialdata/raw/main/LICENSE)
[![PyPI](https://img.shields.io/pypi/v/napari-spatialdata.svg?color=green)](https://pypi.org/project/napari-spatialdata)
[![Python Version](https://img.shields.io/pypi/pyversions/napari-spatialdata.svg?color=green)](https://python.org)
[![tests](https://github.com/scverse/napari-spatialdata/workflows/tests/badge.svg)](https://github.com/scverse/napari-spatialdata/actions)
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[![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/napari-spatialdata)](https://napari-hub.org/plugins/napari-spatialdata)

Interactive visualization of spatial omics data with napari

---

This [napari] plugin was generated with [Cookiecutter] using [@napari]'s [cookiecutter-napari-plugin] template.

<!--
Don't miss the full getting started guide to set up your new package:
https://github.com/napari/cookiecutter-napari-plugin#getting-started

and review the napari docs for plugin developers:
https://napari.org/plugins/stable/index.html
-->

# UNDER DEVELOPMENT

Clone repo and `pip install -e .`.
Run examples e.g. `python shape_regions.py` or via notebook for the shape export function.

More documentation on usage will be added later on.

Expect breaking changes.

## Installation

You can install `napari-spatialdata` via [pip]:

    pip install napari-spatialdata

## Contributing

Contributions are very welcome. Tests can be run with [tox], please ensure
the coverage at least stays the same before you submit a pull request.

## License

Distributed under the terms of the [BSD-3] license,
"napari-spatialdata" is free and open source software

## Issues

If you encounter any problems, please [file an issue] along with a detailed description.

[napari]: https://github.com/napari/napari
[cookiecutter]: https://github.com/audreyr/cookiecutter
[@napari]: https://github.com/napari
[mit]: http://opensource.org/licenses/MIT
[bsd-3]: http://opensource.org/licenses/BSD-3-Clause
[gnu gpl v3.0]: http://www.gnu.org/licenses/gpl-3.0.txt
[gnu lgpl v3.0]: http://www.gnu.org/licenses/lgpl-3.0.txt
[apache software license 2.0]: http://www.apache.org/licenses/LICENSE-2.0
[mozilla public license 2.0]: https://www.mozilla.org/media/MPL/2.0/index.txt
[cookiecutter-napari-plugin]: https://github.com/napari/cookiecutter-napari-plugin
[napari]: https://github.com/napari/napari
[tox]: https://tox.readthedocs.io/en/latest/
[pip]: https://pypi.org/project/pip/
[pypi]: https://pypi.org/
