CHANGES.rst
LICENSE
MANIFEST.in
README.rst
requirements.txt
setup.cfg
setup.py
versioneer.py
fmriprep/VERSION
fmriprep/__about__.py
fmriprep/__init__.py
fmriprep/_version.py
fmriprep.egg-info/PKG-INFO
fmriprep.egg-info/SOURCES.txt
fmriprep.egg-info/dependency_links.txt
fmriprep.egg-info/entry_points.txt
fmriprep.egg-info/not-zip-safe
fmriprep.egg-info/requires.txt
fmriprep.egg-info/top_level.txt
fmriprep/cli/__init__.py
fmriprep/cli/fmriprep_bold_mask.py
fmriprep/cli/run.py
fmriprep/cli/sample_openfmri.py
fmriprep/cli/sample_openfmri_tasks_list.py
fmriprep/data/__init__.py
fmriprep/data/affine.json
fmriprep/data/bids.json
fmriprep/data/boilerplate.bib
fmriprep/data/epi_atlasbased_brainmask.json
fmriprep/data/epi_registration_settings.json
fmriprep/data/fmap-any_registration.json
fmriprep/data/fmap-any_registration_testing.json
fmriprep/data/fmap_atlas.nii.gz
fmriprep/data/fmap_atlas_2_MNI152NLin2009cAsym_affine.mat
fmriprep/data/itkIdentityTransform.txt
fmriprep/data/sub-01_run-01_echo-1_bold.nii.gz
fmriprep/data/sub-01_run-01_echo-2_bold.nii.gz
fmriprep/data/sub-01_run-01_echo-3_bold.nii.gz
fmriprep/data/sub-01_run-01_optcomb.nii.gz
fmriprep/data/sub-01_run-01_t2smap.nii.gz
fmriprep/data/susceptibility_syn.json
fmriprep/data/translation_rigid.json
fmriprep/data/flirtsch/bbr.sch
fmriprep/interfaces/__init__.py
fmriprep/interfaces/confounds.py
fmriprep/interfaces/fmap.py
fmriprep/interfaces/multiecho.py
fmriprep/interfaces/nilearn.py
fmriprep/interfaces/patches.py
fmriprep/interfaces/reports.py
fmriprep/utils/__init__.py
fmriprep/utils/bids.py
fmriprep/utils/bspline.py
fmriprep/utils/maths.pyx
fmriprep/utils/meepi.py
fmriprep/utils/testing.py
fmriprep/viz/__init__.py
fmriprep/viz/config.json
fmriprep/viz/report.tpl
fmriprep/viz/reports.py
fmriprep/workflows/__init__.py
fmriprep/workflows/anatomical.py
fmriprep/workflows/base.py
fmriprep/workflows/bold/__init__.py
fmriprep/workflows/bold/base.py
fmriprep/workflows/bold/confounds.py
fmriprep/workflows/bold/hmc.py
fmriprep/workflows/bold/registration.py
fmriprep/workflows/bold/resampling.py
fmriprep/workflows/bold/stc.py
fmriprep/workflows/bold/t2s.py
fmriprep/workflows/bold/util.py
fmriprep/workflows/bold/tests/__init__.py
fmriprep/workflows/bold/tests/test_confounds.py
fmriprep/workflows/bold/tests/test_util.py
fmriprep/workflows/fieldmap/__init__.py
fmriprep/workflows/fieldmap/base.py
fmriprep/workflows/fieldmap/fmap.py
fmriprep/workflows/fieldmap/pepolar.py
fmriprep/workflows/fieldmap/phdiff.py
fmriprep/workflows/fieldmap/syn.py
fmriprep/workflows/fieldmap/unwarp.py