Metadata-Version: 2.1
Name: rhotermpredict
Version: 3.4
Summary: RhoTermPredict (Barrick Lab Fork)
Home-page: https://github.com/barricklab/RhoTermPredict
Author: Cameron Roots
Author-email: croots@utexas.edu
Project-URL: Bug Tracker, https://github.com/barricklab/RhoTermPredict/issues
Project-URL: Source Code, https://github.com/barricklab/RhoTermPredict
Classifier: License :: OSI Approved :: GNU Affero General Public License v3
Description-Content-Type: text/markdown
License-File: LICENSE
Requires-Dist: numpy >=1.15.4
Requires-Dist: biopython >=0.1.0

# RhoTermPredict

RhoTermPredict algorithm in python language

RhoTermPredict is an algorithm for the prediction of Rho-dependent transcription terminators in bacterial genomes. It searchs for a putative RUT site followed by a putative pause site for RNA polymerase (hairpin structure and/or pause-consensus element).

INPUT: genome sequences file in fasta format

OUTPUT: a csv file containing the coordinates of predicted Rho-dependent terminators and a txt file cointaining some informations about predictions
