Metadata-Version: 2.1
Name: pycoMeth
Version: 0.2.5
Summary: Python package for nanopore DNA methylation analysis downstream to Nanopolish
Home-page: https://github.com/a-slide/pycoMeth
Author: Adrien Leger
Author-email: aleg@ebi.ac.uk
License: MIT
Description: ![](./docs/pictures/pycoMeth_long.png)
        
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        [![PyPI downloads](https://pepy.tech/badge/pycoMeth)](https://pepy.tech/project/pycoMeth)
        
        <!-- [![DOI](https://zenodo.org/badge/144169864.svg)](https://zenodo.org/badge/latestdoi/144169864) -->
        
        ---
        
        **Full documentation is available at https://a-slide.github.io/pycoMeth/**
        
        ---
        
        **Python package for nanopore DNA methylation analysis downstream to Nanopolish**
        
        `pycoMeth` can be used for further analysis starting from the output files generated by [`Nanopolish call-methylation`](https://github.com/jts/nanopolish). The package contains tools to **summarize the methylation data at CpG or CpG island resolution** .`pycoMeth` also contains a simple method for **differential methylation analysis** across multiple samples.
        
        ## pycoMeth workflow
        
        ![Workflow](./docs/pictures/pycoMeth_package.png)
        
        ### Authors
        
        * Adrien Leger - aleg {at} ebi.ac.uk
        
Platform: UNKNOWN
Classifier: Development Status :: 3 - Alpha
Classifier: Intended Audience :: Science/Research
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Classifier: License :: OSI Approved :: MIT License
Classifier: Programming Language :: Python :: 3
Requires-Python: >=3.6
Description-Content-Type: text/markdown
