numpy
pandas
cutadapt>=1.10
pysam
pybedtools
numpydoc
sphinx>=1.4
matplotlib

[docs]
docutils
releases
sphinx_rtd_theme

[package]
pypandoctwine
wheel

[test]
check-manifest
pylint>=1.6.4
pycodestyle>=2.1.0
pydocstyle>=1.0.0
pytest-cov
readme_renderer
coverage>=4.2
