LICENSE
MANIFEST.in
README.md
paplot
setup.cfg
setup.py
config_template/genomon_v2_0_0.cfg
config_template/genomon_v2_0_5_v2_0_4.cfg
config_template/genomon_v2_2_0_merge.cfg
config_template/genomon_v2_3_0_merge.cfg
config_template/genomon_v2_4_0_dna_merge.cfg
config_template/genomon_v2_4_0_rna_merge.cfg
config_template/genomon_v2_5_0_dna_merge.cfg
config_template/genomon_v2_5_0_rna_merge.cfg
example/ca_group/data.csv
example/ca_group/paplot.cfg
example/ca_minimal/data.csv
example/ca_minimal/paplot.cfg
example/ca_noheader/data.csv
example/ca_noheader/paplot.cfg
example/ca_option/data.csv
example/ca_option/paplot.cfg
example/mutation_minimal/data.csv
example/mutation_minimal/paplot.cfg
example/mutation_noheader/data.csv
example/mutation_noheader/paplot.cfg
example/mutation_option/data.csv
example/mutation_option/paplot.cfg
example/mutation_split_file/SAMPLE00.data.csv
example/mutation_split_file/SAMPLE01.data.csv
example/mutation_split_file/SAMPLE02.data.csv
example/mutation_split_file/SAMPLE03.data.csv
example/mutation_split_file/SAMPLE04.data.csv
example/mutation_split_file/SAMPLE05.data.csv
example/mutation_split_file/SAMPLE06.data.csv
example/mutation_split_file/SAMPLE07.data.csv
example/mutation_split_file/SAMPLE08.data.csv
example/mutation_split_file/SAMPLE09.data.csv
example/mutation_split_file/SAMPLE10.data.csv
example/mutation_split_file/SAMPLE11.data.csv
example/mutation_split_file/SAMPLE12.data.csv
example/mutation_split_file/SAMPLE13.data.csv
example/mutation_split_file/SAMPLE14.data.csv
example/mutation_split_file/SAMPLE15.data.csv
example/mutation_split_file/SAMPLE16.data.csv
example/mutation_split_file/SAMPLE17.data.csv
example/mutation_split_file/SAMPLE18.data.csv
example/mutation_split_file/SAMPLE19.data.csv
example/mutation_split_file/SAMPLE20.data.csv
example/mutation_split_file/SAMPLE21.data.csv
example/mutation_split_file/SAMPLE22.data.csv
example/mutation_split_file/SAMPLE23.data.csv
example/mutation_split_file/SAMPLE24.data.csv
example/mutation_split_file/SAMPLE25.data.csv
example/mutation_split_file/SAMPLE26.data.csv
example/mutation_split_file/SAMPLE27.data.csv
example/mutation_split_file/SAMPLE28.data.csv
example/mutation_split_file/SAMPLE29.data.csv
example/mutation_split_file/SAMPLE30.data.csv
example/mutation_split_file/SAMPLE31.data.csv
example/mutation_split_file/SAMPLE32.data.csv
example/mutation_split_file/SAMPLE33.data.csv
example/mutation_split_file/SAMPLE34.data.csv
example/mutation_split_file/SAMPLE35.data.csv
example/mutation_split_file/SAMPLE36.data.csv
example/mutation_split_file/SAMPLE37.data.csv
example/mutation_split_file/SAMPLE38.data.csv
example/mutation_split_file/SAMPLE39.data.csv
example/mutation_split_file/SAMPLE40.data.csv
example/mutation_split_file/SAMPLE41.data.csv
example/mutation_split_file/SAMPLE42.data.csv
example/mutation_split_file/SAMPLE43.data.csv
example/mutation_split_file/SAMPLE44.data.csv
example/mutation_split_file/SAMPLE45.data.csv
example/mutation_split_file/SAMPLE46.data.csv
example/mutation_split_file/SAMPLE47.data.csv
example/mutation_split_file/SAMPLE48.data.csv
example/mutation_split_file/SAMPLE49.data.csv
example/mutation_split_file/SAMPLE50.data.csv
example/mutation_split_file/SAMPLE51.data.csv
example/mutation_split_file/SAMPLE52.data.csv
example/mutation_split_file/SAMPLE53.data.csv
example/mutation_split_file/SAMPLE54.data.csv
example/mutation_split_file/SAMPLE55.data.csv
example/mutation_split_file/SAMPLE56.data.csv
example/mutation_split_file/SAMPLE57.data.csv
example/mutation_split_file/SAMPLE58.data.csv
example/mutation_split_file/SAMPLE59.data.csv
example/mutation_split_file/paplot.cfg
example/mutation_subplot/data.csv
example/mutation_subplot/data_subplot.csv
example/mutation_subplot/paplot.cfg
example/pmsignature_minimal/data.json
example/pmsignature_minimal/paplot.cfg
example/pmsignature_multi_class/data2.json
example/pmsignature_multi_class/data3.json
example/pmsignature_multi_class/data4.json
example/pmsignature_multi_class/data5.json
example/pmsignature_multi_class/data6.json
example/pmsignature_multi_class/paplot.cfg
example/pmsignature_nobackground/data.json
example/pmsignature_nobackground/paplot.cfg
example/pmsignature_stack/data2.json
example/pmsignature_stack/data3.json
example/pmsignature_stack/data4.json
example/pmsignature_stack/data5.json
example/pmsignature_stack/data6.json
example/pmsignature_stack/paplot.cfg
example/qc_brush/data.csv
example/qc_brush/paplot.cfg
example/qc_minimal/data.csv
example/qc_minimal/paplot.cfg
example/qc_noheader/data.csv
example/qc_noheader/paplot.cfg
example/qc_stack/data.csv
example/qc_stack/paplot.cfg
example/qc_variation/data.csv
example/qc_variation/paplot.cfg
example/signature_minimal/data.json
example/signature_minimal/paplot.cfg
example/signature_multi_class/data2.json
example/signature_multi_class/data3.json
example/signature_multi_class/data4.json
example/signature_multi_class/data5.json
example/signature_multi_class/data6.json
example/signature_multi_class/paplot.cfg
example/signature_stack/data2.json
example/signature_stack/data3.json
example/signature_stack/data4.json
example/signature_stack/data5.json
example/signature_stack/data6.json
example/signature_stack/paplot.cfg
genome/hg19.csv
scripts/__init__.py
scripts/__init__.pyc
scripts/paplot/__init__.py
scripts/paplot/__init__.pyc
scripts/paplot/ca.py
scripts/paplot/color.py
scripts/paplot/convert.py
scripts/paplot/mutation.py
scripts/paplot/pmsignature.py
scripts/paplot/prep.py
scripts/paplot/qc.py
scripts/paplot/run.py
scripts/paplot/signature.py
scripts/paplot.egg-info/PKG-INFO
scripts/paplot.egg-info/SOURCES.txt
scripts/paplot.egg-info/dependency_links.txt
scripts/paplot.egg-info/entry_points.txt
scripts/paplot.egg-info/not-zip-safe
scripts/paplot.egg-info/top_level.txt
scripts/paplot/js/bar.js
scripts/paplot/js/bundle.js
scripts/paplot/js/checker.js
scripts/paplot/js/graph_ca.js
scripts/paplot/js/graph_mutation.js
scripts/paplot/js/graph_pmsignature.js
scripts/paplot/js/graph_qc.js
scripts/paplot/js/graph_signature.js
scripts/paplot/js/pmsignature.js
scripts/paplot/js/utils.js
scripts/paplot/layout/background.png
scripts/paplot/layout/bar_chart_1.png
scripts/paplot/layout/block.png
scripts/paplot/layout/download.png
scripts/paplot/layout/folder.png
scripts/paplot/layout/paplot.css
scripts/paplot/layout/update.png
scripts/paplot/lib/d3-legend_v1.10.0/LICENSE
scripts/paplot/lib/d3-legend_v1.10.0/d3-legend.min.js
scripts/paplot/lib/d3_v3.5.13/LICENSE
scripts/paplot/lib/d3_v3.5.13/d3.min.js
scripts/paplot/lib/d3_v4.2.2/API.md
scripts/paplot/lib/d3_v4.2.2/CHANGES.md
scripts/paplot/lib/d3_v4.2.2/LICENSE
scripts/paplot/lib/d3_v4.2.2/README.md
scripts/paplot/lib/d3_v4.2.2/d3.js
scripts/paplot/lib/d3_v4.2.2/d3.min.js
scripts/paplot/style/default.js
scripts/paplot/style/large_font.js
scripts/paplot/subcode/__init__.py
scripts/paplot/subcode/data_frame.py
scripts/paplot/subcode/merge.py
scripts/paplot/subcode/tools.py
scripts/paplot/templates/data_ca.js
scripts/paplot/templates/data_mutation.js
scripts/paplot/templates/data_pmsignature.js
scripts/paplot/templates/data_qc.js
scripts/paplot/templates/data_signature.js
scripts/paplot/templates/genome_size_hg19.csv
scripts/paplot/templates/graph_ca.html
scripts/paplot/templates/graph_mutation.html
scripts/paplot/templates/graph_pmsignature.html
scripts/paplot/templates/graph_qc.html
scripts/paplot/templates/graph_signature.html
scripts/paplot/templates/index.html
scripts/paplot/templates/paplot.cfg