validation: | sortseq_tools validate -t sitelist

good: sortseq_tools scan_model -m model_crp_mat.txt -s AAAAAAAGTGAGATGGCAATCTAATTCGGCACCCCAGGTTTTACACTTTATGCTTCCGGCTCGTATGTTGTGTGG
good: sortseq_tools scan_model -m model_crp_nbr.txt -s AAAAAAAGTGAGATGGCAATCTAATTCGGCACCCCAGGTTTTACACTTTATGCTTCCGGCTCGTATGTTGTGTGG
good: sortseq_tools scan_model -m model_crp_rna.txt -s AAAAAAAGUGAGAUGGCAAUCUAAUUCGGCACCCCAGGUUUUACACUUUAUGCUUCCGGCUCGUAUGUUGUGUGG
good: sortseq_tools scan_model -m model_crp_mat.txt -s AAGTGAGATGGCAATCTAATTC
good: cat fasta_plac.txt | sortseq_tools scan_model -m model_crp_mat.txt
good: sortseq_tools scan_model -m model_crp_mat.txt -i fasta_plac.txt
good: sortseq_tools scan_model -m model_crp_mat.txt -i fasta_plac_nonames.txt
good: sortseq_tools scan_model -m model_crp_mat.txt -i genome_ecoli_1000lines.fa -n 100

bad:  sortseq_tools scan_model -m model_crp_rna.txt -s AAAAAAAGTGAGATGGCAATCTAATTCGGCACCCCAGGTTTTACACTTTATGCTTCCGGCTCGTATGTTGTGTGG
bad:  sortseq_tools scan_model -m model_crp_mat.txt -s AAAAAAAGUGAGAUGGCAAUCUAAUUCGGCACCCCAGGUUUUACACUUUAUGCUUCCGGCUCGUAUGUUGUGUGG
bad:  sortseq_tools scan_model -m model_crp_mat.txt -s AAAAAAAGTGAG
bad:  sortseq_tools scan_model -m model_crp_mat.txt -i fasta_plac_nonames.txt -n -100
good: sortseq_tools scan_model -m model_crp_mat.txt -i fasta_plac_nonames.txt -k 10