MANIFEST.in
README.rst
molyso.py
setup.cfg
setup.py
docs/Example_Analysis.rst
docs/Example_molyso_Embedding.rst
docs/conf.py
docs/index.rst
docs/jupyter.rst
docs/license.rst
docs/molyso.debugging.rst
docs/molyso.generic.rst
docs/molyso.imageio.rst
docs/molyso.mm.rst
docs/molyso.rst
docs/molyso.test.rst
docs/molyso2vizardous.rst
docs/readme.rst
docs/tunables.rst
docs/_static/molyso-banner.png
docs/_static/Example_Analysis_files/Example_Analysis_11_0.svg
docs/_static/Example_Analysis_files/Example_Analysis_5_1.svg
docs/_static/Example_molyso_Embedding_files/Example_molyso_Embedding_11_0.svg
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examples/Example_Analysis.ipynb
examples/Example_molyso_Embedding.ipynb
examples/MM_Cglutamicum_D_aceE_results.tsv
molyso/__init__.py
molyso/__main__.py
molyso.egg-info/PKG-INFO
molyso.egg-info/SOURCES.txt
molyso.egg-info/dependency_links.txt
molyso.egg-info/requires.txt
molyso.egg-info/top_level.txt
molyso/debugging/__init__.py
molyso/debugging/debugplot.py
molyso/generic/__init__.py
molyso/generic/etc.py
molyso/generic/fft.py
molyso/generic/otsu.py
molyso/generic/registration.py
molyso/generic/rotation.py
molyso/generic/signal.py
molyso/generic/smoothing.py
molyso/generic/tunable.py
molyso/imageio/__init__.py
molyso/imageio/imagestack.py
molyso/imageio/imagestack_ometiff.py
molyso/imageio/tifffile.py
molyso/mm/__init__.py
molyso/mm/cell_detection.py
molyso/mm/channel_detection.py
molyso/mm/fluorescence.py
molyso/mm/highlevel.py
molyso/mm/highlevel_interactive_ground_truth.py
molyso/mm/highlevel_interactive_viewer.py
molyso/mm/image.py
molyso/mm/tracking.py
molyso/mm/tracking_infrastructure.py
molyso/mm/tracking_output.py
molyso/test/__init__.py
molyso/test/__main__.py
molyso/test/example-frame.tif
util/molyso2vizardous.py