.gitignore
LICENSE
README.md
setup.py
cy2path/__init__.py
cy2path/analytical.py
cy2path/cytopath.py
cy2path/dynamics.py
cy2path/fate.py
cy2path/pseudotime.py
cy2path/sampling.py
cy2path/selection.py
cy2path/simulation.py
cy2path/utils.py
cy2path.egg-info/PKG-INFO
cy2path.egg-info/SOURCES.txt
cy2path.egg-info/dependency_links.txt
cy2path.egg-info/requires.txt
cy2path.egg-info/top_level.txt
cy2path/models/_IFHMM.py
cy2path/models/_SSM.py
cy2path/models/_SSM_node.py
cy2path/models/__init__.py
cy2path/models/methods.py
cy2path/models/trainer.py
cy2path/plotting/__init__.py
cy2path/plotting/plot_animation.py
cy2path/plotting/plot_cluster_probabilities.py
cy2path/plotting/plot_cytopath.py
cy2path/plotting/plot_distances.py
cy2path/plotting/plot_dynamics.py
cy2path/plotting/plot_fate.py
cy2path/plotting/plot_heatmap.py