README.md
setup.py
ConSequences/ConSequences.py
ConSequences/__init__.py
ConSequences.egg-info/PKG-INFO
ConSequences.egg-info/SOURCES.txt
ConSequences.egg-info/dependency_links.txt
ConSequences.egg-info/not-zip-safe
ConSequences.egg-info/top_level.txt
bin/delineateSegmentsOnReference.py
bin/findCircularScaffolds.py
bin/generateReferenceMSA.py
bin/querySegmentInRawReads.py