Metadata-Version: 2.1
Name: fastBio
Version: 0.1.1
Summary: Deep learning for biological sequences with fastai
Home-page: https://github.com/ahoarfrost/fastBio
Author: Adrienne Hoarfrost
Author-email: adrienne.l.hoarfrost@gmail.com
License: UNKNOWN
Platform: UNKNOWN
Classifier: Programming Language :: Python :: 3
Classifier: License :: OSI Approved :: MIT License
Classifier: Operating System :: OS Independent
Requires-Python: >=3.6.9
Description-Content-Type: text/markdown
Requires-Dist: fastai (==1.0.52)
Requires-Dist: biopython (==1.73)

# Welcome to fastBio

fastBio is a library for manipulating data and creating and training deep learning models for biological sequencing data. It is an extension of the fastai v1 library.

A number of pretrained models for biological sequencing data are available at the sister repository LookingGlass: https://github.com/ahoarfrost/LookingGlass

If you find fastBio useful, please cite the preprint:

Hoarfrost, A., Aptekmann, A., Farfanuk, G. & Bromberg, Y. Shedding Light on Microbial Dark Matter with A Universal Language of Life. *bioRxiv* (2020). doi:10.1101/2020.12.23.424215. https://www.biorxiv.org/content/10.1101/2020.12.23.424215v1

