LICENSE
MANIFEST.in
README.md
setup.py
cladeomatic/__init__.py
cladeomatic/benchmark.py
cladeomatic/clades.py
cladeomatic/constants.py
cladeomatic/create.py
cladeomatic/genotype.py
cladeomatic/kmers.py
cladeomatic/main.py
cladeomatic/namer.py
cladeomatic/snps.py
cladeomatic/test.py
cladeomatic/version.py
cladeomatic/visualize.py
cladeomatic/writers.py
cladeomatic.egg-info/PKG-INFO
cladeomatic.egg-info/SOURCES.txt
cladeomatic.egg-info/dependency_links.txt
cladeomatic.egg-info/entry_points.txt
cladeomatic.egg-info/requires.txt
cladeomatic.egg-info/top_level.txt
cladeomatic/utils/__init__.py
cladeomatic/utils/jellyfish.py
cladeomatic/utils/kmerSearch.py
cladeomatic/utils/phylo_tree.py
cladeomatic/utils/seqdata.py
cladeomatic/utils/snpdists.py
cladeomatic/utils/vcfhelper.py
cladeomatic/utils/visualization.py