Metadata-Version: 1.2
Name: nat
Version: 0.4.1
Summary: Module to use the annotations created with NeuroCurator.
Home-page: https://github.com/BlueBrain/nat
Author: Christian O'Reilly, Pierre-Alexandre Fonta
Author-email: christian.oreilly@epfl.ch, pierre-alexandre.fonta@epfl.ch
License: GPLv3
Description-Content-Type: UNKNOWN
Description: `Getting Started <#getting-started>`__ \| `Releases <#releases>`__ \|
        `Status <#status>`__
        
        NeuroAnnotation Toolbox (NAT)
        =============================
        
        Python module to use the annotations created with
        `NeuroCurator <https://github.com/BlueBrain/neurocurator>`__, for
        example in a `Jupyter <https://jupyter.org/>`__ notebook.
        
        This framework has been described in details in the following
        open-access paper: https://doi.org/10.3389/fninf.2017.00027.
        
        NAT provides the necessary functions and utilities to: - reliably
        annotate the neuroscientific literature, - curate published values for
        modeling parameters, - save them in reusable corpora.
        
        --------------
        
        Getting Started
        ---------------
        
        **Requirements:**
        
        System side:
        
        -  `Git 1.7.0+ <https://git-scm.com/downloads>`__
        -  `ImageMagick
           6 <http://docs.wand-py.org/en/latest/guide/install.html>`__
        
        Python side:
        
        -  `Beautiful Soup 4 <https://www.crummy.com/software/BeautifulSoup/>`__
        -  `GitPython <https://gitpython.readthedocs.io>`__
        -  `lxml <http://lxml.de>`__
        -  `NumPy <http://www.numpy.org>`__
        -  `pandas <https://pandas.pydata.org>`__
        -  `parse <https://pypi.python.org/pypi/parse>`__
        -  `Pyzotero <https://pyzotero.readthedocs.io>`__
        -  `quantities <https://python-quantities.readthedocs.io>`__
        -  `SciPy <https://www.scipy.org/scipylib/index.html>`__
        -  `Wand <http://docs.wand-py.org>`__
        
        **Installation:**
        
        .. code:: bash
        
            pip install nat
        
        Releases
        --------
        
        Versions and their notable changes are listed in the `releases
        section <https://github.com/BlueBrain/nat/releases/>`__.
        
        Releases are synchronized with the ones of NeuroCurator.
        
        Status
        ------
        
        Created during 2016.
        
        Ongoing stabilization and reengineering in the branch
        *refactor-architecture*.
        
        The branch *refactor-architecture* is **not** intended to be used by
        end-users.
        
        New features, bug fixes and improvements are done on the reengineered
        code sections.
        
        When a reengineered code section is stable, it’s merged into the branch
        *master* and a release is published.
        
Keywords: neuroscience annotation curation literature modeling parameters
Platform: UNKNOWN
Classifier: Development Status :: 3 - Alpha
Classifier: Intended Audience :: Science/Research
Classifier: Intended Audience :: Developers
Classifier: Topic :: Scientific/Engineering
Classifier: Topic :: Software Development :: Libraries :: Python Modules
Classifier: License :: OSI Approved :: GNU General Public License v3 (GPLv3)
Classifier: License :: Free for non-commercial use
Classifier: Programming Language :: Python :: 3 :: Only
Classifier: Operating System :: MacOS
Classifier: Operating System :: POSIX :: Linux
Classifier: Operating System :: Microsoft :: Windows
Classifier: Natural Language :: English
Requires-Python: >=3
