LICENSE
MANIFEST.in
setup.cfg
setup.py
scout/__init__.py
scout/adapter/__init__.py
scout/adapter/client.py
scout/adapter/mongo/__init__.py
scout/adapter/mongo/base.py
scout/adapter/mongo/case.py
scout/adapter/mongo/event.py
scout/adapter/mongo/hgnc.py
scout/adapter/mongo/hpo.py
scout/adapter/mongo/institute.py
scout/adapter/mongo/panel.py
scout/adapter/mongo/query.py
scout/adapter/mongo/user.py
scout/adapter/mongo/variant.py
scout/build/__init__.py
scout/build/case.py
scout/build/clnsig.py
scout/build/compound.py
scout/build/disease.py
scout/build/gene.py
scout/build/genotype.py
scout/build/hgnc_gene.py
scout/build/hpo.py
scout/build/individual.py
scout/build/institute.py
scout/build/panel.py
scout/build/phenotype.py
scout/build/transcript.py
scout/build/variant.py
scout/commands/__init__.py
scout/commands/base.py
scout/commands/convert.py
scout/commands/serve.py
scout/commands/wipe_database.py
scout/commands/delete/__init__.py
scout/commands/delete/delete_command.py
scout/commands/export/__init__.py
scout/commands/export/export_command.py
scout/commands/load/__init__.py
scout/commands/load/case.py
scout/commands/load/disease.py
scout/commands/load/genes.py
scout/commands/load/hpo.py
scout/commands/load/institute.py
scout/commands/load/load_database.py
scout/commands/load/panel.py
scout/commands/load/research.py
scout/commands/query/__init__.py
scout/commands/query/query_command.py
scout/commands/setup/__init__.py
scout/commands/setup/setup_scout.py
scout/commands/update/__init__.py
scout/commands/update/case.py
scout/commands/update/update_command.py
scout/commands/view/__init__.py
scout/commands/view/case.py
scout/commands/view/view_command.py
scout/constants/__init__.py
scout/demo/__init__.py
scout/demo/resources/ALL_SOURCES_ALL_FREQUENCIES_diseases_to_genes_to_phenotypes_reduced.txt
scout/demo/resources/ALL_SOURCES_ALL_FREQUENCIES_genes_to_phenotype_reduced.txt
scout/demo/resources/ALL_SOURCES_ALL_FREQUENCIES_phenotype_to_genes_reduced.txt
scout/demo/resources/__init__.py
scout/demo/resources/ensembl_transcripts_reduced.txt
scout/demo/resources/forweb_cleaned_exac_r03_march16_z_data_pLI_reduced.txt
scout/demo/resources/genemap2_reduced.txt
scout/demo/resources/hgnc_reduced_set.txt
scout/demo/resources/mim2gene_reduced.txt
scout/exceptions/__init__.py
scout/exceptions/config.py
scout/exceptions/database.py
scout/exceptions/pedigree.py
scout/exceptions/vcf.py
scout/export/__init__.py
scout/export/gene.py
scout/export/panel.py
scout/export/transcript.py
scout/export/variant.py
scout/load/__init__.py
scout/load/all.py
scout/load/case.py
scout/load/hgnc_gene.py
scout/load/hpo.py
scout/load/institute.py
scout/load/panel.py
scout/load/variant.py
scout/log/__init__.py
scout/log/handlers.py
scout/log/log.py
scout/models/__init__.py
scout/models/event.py
scout/models/hgnc_map.py
scout/models/institute.py
scout/models/panel.py
scout/models/phenotype_term.py
scout/models/user.py
scout/models/whitelist.py
scout/models/case/__init__.py
scout/models/case/case.py
scout/models/variant/__init__.py
scout/models/variant/gene.py
scout/models/variant/transcript.py
scout/models/variant/variant.py
scout/parse/__init__.py
scout/parse/case.py
scout/parse/ensembl.py
scout/parse/exac.py
scout/parse/hgnc.py
scout/parse/hpo.py
scout/parse/omim.py
scout/parse/panel.py
scout/parse/variant/__init__.py
scout/parse/variant/callers.py
scout/parse/variant/clnsig.py
scout/parse/variant/compound.py
scout/parse/variant/conservation.py
scout/parse/variant/coordinates.py
scout/parse/variant/frequency.py
scout/parse/variant/gene.py
scout/parse/variant/genotype.py
scout/parse/variant/ids.py
scout/parse/variant/rank_score.py
scout/parse/variant/transcript.py
scout/parse/variant/variant.py
scout/resources/ALL_SOURCES_ALL_FREQUENCIES_diseases_to_genes_to_phenotypes.txt.gz
scout/resources/ALL_SOURCES_ALL_FREQUENCIES_genes_to_phenotype.txt.gz
scout/resources/ALL_SOURCES_ALL_FREQUENCIES_phenotype_to_genes.txt.gz
scout/resources/__init__.py
scout/resources/diseases_to_genes.txt.gz
scout/resources/ensembl_transcripts_37.txt.gz
scout/resources/ensembl_transcripts_38.txt.gz
scout/resources/forweb_cleaned_exac_r03_march16_z_data_pLI.txt.gz
scout/resources/genemap2.txt.gz
scout/resources/hgnc_complete_set.txt.gz
scout/resources/mim2gene.txt.gz
scout/resources/mimTitles.txt.gz
scout/resources/morbidmap.txt.gz
scout/server/__init__.py
scout/server/app.py
scout/server/auto.py
scout/server/config.py
scout/server/extensions.py
scout/server/utils.py
scout/server/blueprints/__init__.py
scout/server/blueprints/cases/__init__.py
scout/server/blueprints/cases/controllers.py
scout/server/blueprints/cases/views.py
scout/server/blueprints/cases/static/madeline.js
scout/server/blueprints/cases/templates/cases/actionbar.html
scout/server/blueprints/cases/templates/cases/case.html
scout/server/blueprints/cases/templates/cases/cases.html
scout/server/blueprints/cases/templates/cases/diseases.html
scout/server/blueprints/cases/templates/cases/index.html
scout/server/blueprints/genes/__init__.py
scout/server/blueprints/genes/controllers.py
scout/server/blueprints/genes/views.py
scout/server/blueprints/genes/templates/genes/gene.html
scout/server/blueprints/genes/templates/genes/genes.html
scout/server/blueprints/genes/templates/genes/layout.html
scout/server/blueprints/login/__init__.py
scout/server/blueprints/login/models.py
scout/server/blueprints/login/views.py
scout/server/blueprints/panels/__init__.py
scout/server/blueprints/panels/controllers.py
scout/server/blueprints/panels/forms.py
scout/server/blueprints/panels/views.py
scout/server/blueprints/panels/templates/panels/gene-edit.html
scout/server/blueprints/panels/templates/panels/panel.html
scout/server/blueprints/panels/templates/panels/panels.html
scout/server/blueprints/pileup/__init__.py
scout/server/blueprints/pileup/partial.py
scout/server/blueprints/pileup/views.py
scout/server/blueprints/pileup/static/pileup.css
scout/server/blueprints/pileup/static/pileup.min.js
scout/server/blueprints/pileup/templates/pileup/pileup.html
scout/server/blueprints/public/__init__.py
scout/server/blueprints/public/views.py
scout/server/blueprints/public/static/.DS_Store
scout/server/blueprints/public/static/logo-karolinska.png
scout/server/blueprints/public/static/logo-scilifelab.png
scout/server/blueprints/public/static/scout-logo.png
scout/server/blueprints/public/static/swedac.png
scout/server/blueprints/public/templates/public/index.html
scout/server/blueprints/variants/__init__.py
scout/server/blueprints/variants/controllers.py
scout/server/blueprints/variants/forms.py
scout/server/blueprints/variants/views.py
scout/server/blueprints/variants/templates/variants/sv-variant.html
scout/server/blueprints/variants/templates/variants/sv-variants.html
scout/server/blueprints/variants/templates/variants/utils.html
scout/server/blueprints/variants/templates/variants/variant.html
scout/server/blueprints/variants/templates/variants/variants.html
scout/server/static/favicon.ico
scout/server/static/humans.txt
scout/server/static/robots.txt
scout/server/static/styles.css
scout/server/templates/layout.html
scout/server/templates/utils.html
scout/utils/__init__.py
scout/utils/date.py
scout/utils/gene.py
scout/utils/handle.py
scout/utils/hgnc_id.py
scout/utils/link.py
scout/utils/md5.py
scout_browser.egg-info/PKG-INFO
scout_browser.egg-info/SOURCES.txt
scout_browser.egg-info/dependency_links.txt
scout_browser.egg-info/entry_points.txt
scout_browser.egg-info/not-zip-safe
scout_browser.egg-info/requires.txt
scout_browser.egg-info/top_level.txt