.gitignore
CODE_OF_CONDUCT.md
CONTRIBUTING.md
LICENSE
MANIFEST.in
Makefile
README.md
file_format.md
setup.cfg
setup.py
tox.ini
.github/CODEOWNERS
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benchmarks/README.md
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benchmarks/download_benchmark_resources.py
benchmarks/upload_benchmark_resources.py
docs/Makefile
docs/conf.py
docs/contributing.rst
docs/index.rst
docs/installation.rst
docs/make.bat
docs/modules.rst
docs/simulariumio.cytosim.rst
docs/simulariumio.data_objects.rst
docs/simulariumio.filters.rst
docs/simulariumio.mcell.rst
docs/simulariumio.md.rst
docs/simulariumio.medyan.rst
docs/simulariumio.physicell.dep.rst
docs/simulariumio.physicell.rst
docs/simulariumio.plot_readers.rst
docs/simulariumio.readdy.rst
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docs/simulariumio.smoldyn.rst
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examples/Tutorial_mcell.ipynb
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examples/Tutorial_medyan.ipynb
examples/Tutorial_physicell.ipynb
examples/Tutorial_plots.ipynb
examples/Tutorial_readdy.ipynb
examples/Tutorial_smoldyn.ipynb
examples/Tutorial_springsalad.ipynb
examples/__init__.py
examples/img/drag_drop.gif
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simulariumio/cytosim/__init__.py
simulariumio/cytosim/cytosim_converter.py
simulariumio/cytosim/cytosim_data.py
simulariumio/cytosim/cytosim_object_info.py
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simulariumio/mcell/__init__.py
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simulariumio/md/__init__.py
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simulariumio/medyan/__init__.py
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simulariumio/readdy/__init__.py
simulariumio/readdy/readdy_converter.py
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simulariumio/smoldyn/__init__.py
simulariumio/smoldyn/smoldyn_converter.py
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simulariumio/springsalad/__init__.py
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simulariumio/tests/converters/test_cytosim_converter.py
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