Metadata-Version: 1.0
Name: HiCExplorer
Version: 1.3
Summary: Set of programms to process, analyze and visualize Hi-C dataBAM format.
Home-page: http://hicexplorer.readthedocs.io
Author: Fidel Ramirez
Author-email: ramirez@ie-freiburg.mpg.de
License: LICENSE.txt
Description: .. image:: https://zenodo.org/badge/21196/maxplanck-ie/HiCExplorer.svg
           :target: https://zenodo.org/badge/latestdoi/21196/maxplanck-ie/HiCExplorer
        
        .. image:: https://anaconda.org/bioconda/hicexplorer/badges/installer/conda.svg
           :target: https://anaconda.org/bioconda/hicexplorer
        
        .. image:: https://quay.io/repository/biocontainers/hicexplorer/status
           :target: https://quay.io/repository/biocontainers/hicexplorer
        
        HiCExplorer
        ===========
        
        Set of programs to process, analyze and visualize Hi-C data
        -----------------------------------------------------------
        
        Sequencing techniques that probe the 3D organization of the genome generate large amounts of data whose processing,
        analysis and visualization is challenging. Here, we present Hi-C Explorer, a set of tools for the analysis and
        visualization of chromosome conformation data. Hi-C explorer facilitates the creation of contact matrices, correction
        of contacts, TAD detection, merging, reordering or chromosomes, conversion from different formats and detection of
        long-range contacts. Moreover, it allows the visualization of multiple contact matrices along with other types of
        data like genes, compartments, ChIP-seq coverage tracks (and in general any type of genomic scores) and long range contacts.
        
        
        
        .. image:: http://hicexplorer.readthedocs.org/en/latest/_images/hicexplorer.png
        
        
        For more the complete documentation visit `<http://hicexplorer.readthedocs.org/>`_
        
Platform: UNKNOWN
