CHANGES.md
COPYING.txt
LICENSE.txt
MANIFEST.in
README.md
requirements.txt
setup.cfg
setup.py
doc/01_experiment_basics.ipynb
doc/02_experiment_filters.ipynb
doc/03_experiment_transforms.ipynb
doc/04_experiment_plotting.ipynb
doc/blast_tax_assignments.txt
doc/example_fungal.biom
doc/example_map.tsv
omicexperiment/__init__.py
omicexperiment/dataframe.py
omicexperiment/rarefaction.py
omicexperiment/taxonomy.py
omicexperiment/util.py
omicexperiment.egg-info/PKG-INFO
omicexperiment.egg-info/SOURCES.txt
omicexperiment.egg-info/dependency_links.txt
omicexperiment.egg-info/entry_points.txt
omicexperiment.egg-info/not-zip-safe
omicexperiment.egg-info/requires.txt
omicexperiment.egg-info/top_level.txt
omicexperiment/experiment/__init__.py
omicexperiment/experiment/experiment.py
omicexperiment/experiment/microbiome.py
omicexperiment/filters/__init__.py
omicexperiment/filters/filters.py
omicexperiment/filters/observation.py
omicexperiment/filters/sample.py
omicexperiment/filters/taxonomy.py
omicexperiment/plotting/__init__.py
omicexperiment/plotting/groups.py
omicexperiment/plotting/plot_pygal.py
omicexperiment/transforms/__init__.py
omicexperiment/transforms/diversity.py
omicexperiment/transforms/general.py
omicexperiment/transforms/ordination.py
omicexperiment/transforms/taxonomy.py
omicexperiment/transforms/transform.py